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MT701598.1__QPB09932.1__CPT_Sitrop_017__00017
Bact-VirMT701598.1__QPB09932.1__CPT_Sitrop_017__00017
Identity
- Accession:
- MT701598 ↗
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Taxonomy
TaxID: 2767587
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 412-558
Domain cluster:
rep: OQ672749.1__WJN63198.1__X__00024__D198-342
D2
high
residues 565-682
Domain cluster:
rep: KT945994.2__ALO80985.1__X__00022__D684-793
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.77 | 59.0 | 6.25e-01 | 100.0% | 89.4% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.76 | 58.0 | 6.14e-01 | 100.0% | 88.8% |
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.73 | 59.0 | 6.13e-01 | 100.0% | 91.8% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 29.0 | 3.55e-01 | 81.4% | 73.0% |
| 1opoA02 | 2.60.40.1780 | Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein | 0.55 | 38.0 | 4.07e-01 | 100.0% | 82.5% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.53 | 34.0 | 3.43e-01 | 85.6% | 64.1% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 40.0 | 2.75e-01 | 80.5% | 88.2% |
| 7mhuA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 41.0 | 2.94e-01 | 85.6% | 80.5% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 40.0 | 2.95e-01 | 86.4% | 65.9% |
| 5hx0A00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 40.0 | 2.86e-01 | 84.7% | 53.7% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 40.0 | 2.89e-01 | 86.4% | 65.5% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.50 | 41.0 | 3.87e-01 | 90.7% | 82.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 961561 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.77 | 59.0 | 6.27e-01 | 100.0% | 90.3% |
| 1156585 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.76 | 58.0 | 6.00e-01 | 100.0% | 84.1% |
| 184600 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.73 | 59.0 | 6.13e-01 | 100.0% | 91.8% |
| 5047154 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.64 | 48.0 | 3.89e-01 | 97.5% | 41.3% |
| 4991092 | 3370.1.1.0 ↗ | beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 | 0.55 | 35.0 | 4.10e-01 | 96.6% | 96.2% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.54 | 38.0 | 4.15e-01 | 88.1% | 95.6% |
| 3740654 | 1.1.7.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C | 0.54 | 39.0 | 3.83e-01 | 74.6% | 84.0% |
D3
medium
residues 290-367
Domain cluster:
rep: KU160650.1__ALY09289.1__JASMINE_18__00017__D521-583