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MT708546.1__QOE32162.1__CPT_Paso_045__00045
Bact-VirMT708546.1__QOE32162.1__CPT_Paso_045__00045
Identity
- Accession:
- MT708546 ↗
- Kingdom:
- phage
Quality
48.1
mean pLDDT
Taxonomy
TaxID: 2767574
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1139-1180
D2
medium
residues 63-165
D3
medium
residues 411-446_731-755_777-796
D4
medium
residues 472-556
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 43.0 | 3.49e-01 | 72.9% | 78.9% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 39.0 | 3.67e-01 | 70.6% | 69.4% |
| 1h2tC03 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 44.0 | 3.19e-01 | 84.7% | 65.3% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 39.0 | 2.68e-01 | 81.2% | 94.5% |
| 6rv2A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 42.0 | 3.00e-01 | 88.2% | 33.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3597965 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 46.0 | 3.34e-01 | 82.4% | 85.3% |
| 4012854 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 46.0 | 2.74e-01 | 83.5% | 53.3% |
| 3480546 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.58 | 49.0 | 3.51e-01 | 95.3% | 70.9% |
| 3677719 | 109.4.1.152 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPN7 | 0.53 | 40.0 | 2.88e-01 | 82.4% | 55.7% |
| 5081021 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.52 | 46.0 | 3.92e-01 | 100.0% | 83.4% |
| 3393737 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.50 | 45.0 | 3.46e-01 | 100.0% | 66.2% |
D5
medium
residues 557-730
Domain cluster:
rep: MN850592.1__QHR68527.1__aldrigsur_53__00053__D460-583
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tj7A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.64 | 27.0 | 4.29e-01 | 73.0% | 98.6% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.63 | 28.0 | 4.26e-01 | 74.7% | 100.0% |
| 3f2bA07 | 6.10.140.1510 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 29.0 | 3.94e-01 | 79.9% | 93.0% |
| 3kp1E02 | 1.10.8.1000 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like | 0.56 | 24.0 | 3.74e-01 | 85.1% | 100.0% |
| 3ci0K02 | 1.10.40.60 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › EpsJ-like | 0.52 | 34.0 | 4.11e-01 | 85.6% | 100.0% |
| 1ehkA00 | 1.20.210.10 | Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain | 0.51 | 38.0 | 2.70e-01 | 76.4% | 79.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945368 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.62 | 29.0 | 4.23e-01 | 70.7% | 97.5% |
| 5038794 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.51 | 28.0 | 3.70e-01 | 82.8% | 97.9% |
D6
medium
residues 797-945
D7
medium
residues 946-1022