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MT708547.1__QOE32468.1__CPT_Muenster_296__00296
Bact-VirMT708547.1__QOE32468.1__CPT_Muenster_296__00296
Identity
- Accession:
- MT708547 ↗
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Taxonomy
TaxID: 2767572
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61
Domain cluster:
representative
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.80 | 59.0 | 4.31e-01 | 78.7% | 32.9% |
| 2zsjA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.77 | 57.0 | 4.87e-01 | 78.7% | 56.7% |
| 1y7lA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.77 | 57.0 | 4.74e-01 | 78.7% | 52.4% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 56.0 | 4.82e-01 | 78.7% | 56.2% |
| 3phhA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.76 | 57.0 | 4.37e-01 | 78.7% | 39.2% |
| 1qydA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.76 | 56.0 | 3.91e-01 | 78.7% | 31.4% |
| 3ouzA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 56.0 | 4.92e-01 | 78.7% | 58.0% |
| 6wjaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.76 | 55.0 | 3.75e-01 | 77.0% | 26.6% |
| 5h80A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 55.0 | 4.34e-01 | 78.7% | 39.8% |
| 3vrhA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 55.0 | 3.48e-01 | 78.7% | 21.1% |
| 7bvaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.74 | 54.0 | 4.65e-01 | 77.0% | 57.0% |
| 1kjqA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.74 | 54.0 | 4.32e-01 | 78.7% | 40.5% |
| 1xhcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 55.0 | 4.37e-01 | 78.7% | 63.6% |
| 3eagA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 54.0 | 4.67e-01 | 78.7% | 59.1% |
| 2c54A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 53.0 | 3.73e-01 | 77.0% | 27.9% |
| 6qkgA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 54.0 | 4.40e-01 | 78.7% | 69.4% |
| 3iupA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 54.0 | 3.79e-01 | 78.7% | 28.7% |
| 4dimA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.73 | 53.0 | 4.28e-01 | 78.7% | 41.2% |
| 4hnvB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.73 | 53.0 | 3.31e-01 | 78.7% | 14.7% |
| 3tw6C01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.72 | 53.0 | 3.15e-01 | 78.7% | 11.6% |
| 2c5sA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 52.0 | 3.64e-01 | 78.7% | 94.1% |
| 3k5iD01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 52.0 | 4.30e-01 | 78.7% | 50.9% |
| 3k32B00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 52.0 | 3.66e-01 | 78.7% | 29.6% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.71 | 52.0 | 3.52e-01 | 78.7% | 31.0% |
| 2duwA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 52.0 | 4.00e-01 | 78.7% | 39.4% |
| 1j0aA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 52.0 | 4.37e-01 | 78.7% | 54.8% |
| 4lw8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 51.0 | 3.50e-01 | 78.7% | 27.1% |
| 1o6cB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.70 | 58.0 | 3.91e-01 | 90.2% | 68.7% |
| 1yeyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 52.0 | 3.33e-01 | 82.0% | 29.7% |
| 4nesA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.69 | 57.0 | 3.94e-01 | 90.2% | 74.2% |
| 3cz8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 55.0 | 3.74e-01 | 91.8% | 67.8% |
| 4d8tA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 50.0 | 4.14e-01 | 78.7% | 58.7% |
| 5nnlA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 57.0 | 3.65e-01 | 100.0% | 52.8% |
| 2h6eA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 49.0 | 3.78e-01 | 78.7% | 38.5% |
| 2a35A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 49.0 | 3.39e-01 | 78.7% | 27.4% |
| 3ju7A00 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.66 | 57.0 | 3.57e-01 | 100.0% | 34.8% |
| 6kv9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 52.0 | 3.71e-01 | 90.2% | 92.3% |
| 2pzmB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 52.0 | 3.34e-01 | 90.2% | 47.6% |
| 3aw9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 51.0 | 3.67e-01 | 90.2% | 92.3% |
| 1ytlA00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.65 | 56.0 | 4.21e-01 | 100.0% | 92.4% |
| 2vrnA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.64 | 47.0 | 3.37e-01 | 78.7% | 33.5% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 47.0 | 3.23e-01 | 78.7% | 23.7% |
| 2x7jA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.64 | 54.0 | 3.97e-01 | 100.0% | 73.6% |
| 3n12A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 51.0 | 3.29e-01 | 93.4% | 74.1% |
| 5iceA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 46.0 | 3.10e-01 | 78.7% | 20.3% |
| 4gnrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 4.11e-01 | 96.7% | 92.5% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 52.0 | 4.12e-01 | 98.4% | 86.8% |
| 3dmyA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.63 | 49.0 | 3.89e-01 | 90.2% | 57.9% |
| 3qqwC01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.63 | 50.0 | 3.36e-01 | 91.8% | 69.2% |
| 4nqrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 53.0 | 3.99e-01 | 96.7% | 83.9% |
| 4u3aB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 51.0 | 3.38e-01 | 100.0% | 85.0% |
| 6p66D01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.61 | 50.0 | 4.26e-01 | 96.7% | 81.7% |
| 3f6cA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 49.0 | 3.93e-01 | 91.8% | 65.9% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 3.77e-01 | 96.7% | 88.6% |
| 7bvaA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.60 | 53.0 | 3.53e-01 | 96.7% | 67.3% |
| 4o5aA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 3.99e-01 | 96.7% | 64.4% |
| 2g80A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 48.0 | 3.80e-01 | 96.7% | 72.1% |
| 1ycoA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.59 | 49.0 | 3.26e-01 | 96.7% | 88.4% |
| 4nzpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 46.0 | 3.73e-01 | 91.8% | 78.3% |
| 1kamA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 50.0 | 3.62e-01 | 96.7% | 67.8% |
| 5ahoA02 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 48.0 | 3.97e-01 | 100.0% | 95.1% |
| 1i9sA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 46.0 | 3.34e-01 | 90.2% | 76.7% |
| 4z2yA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 46.0 | 3.32e-01 | 96.7% | 76.6% |
| 1atzB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.57 | 46.0 | 3.42e-01 | 96.7% | 76.2% |
| 5eovA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 3.30e-01 | 96.7% | 83.9% |
| 4ha7B00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.56 | 44.0 | 3.22e-01 | 95.1% | 45.9% |
| 4hdrB02 | 3.40.50.10210 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (CobT), large domain | 0.54 | 43.0 | 3.00e-01 | 95.1% | 89.0% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 39.0 | 3.08e-01 | 83.6% | 35.8% |
| 4muoA02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.53 | 43.0 | 3.01e-01 | 96.7% | 77.3% |
| 3r5tA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 40.0 | 3.40e-01 | 93.4% | 96.5% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979620 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.81 | 59.0 | 3.64e-01 | 77.0% | 17.0% |
| None | — | 0.80 | 59.0 | 4.14e-01 | 78.7% | 31.1% | |
| 5071605 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.79 | 58.0 | 3.63e-01 | 78.7% | 19.4% |
| 3423878 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.79 | 56.0 | 4.92e-01 | 75.4% | 61.1% |
| 4619527 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.79 | 57.0 | 5.02e-01 | 77.0% | 65.6% |
| 3958127 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.79 | 57.0 | 4.06e-01 | 77.0% | 31.4% |
| 3366560 | 2003.1.1.143 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA, NAD_binding_10 | 0.78 | 58.0 | 3.59e-01 | 78.7% | 19.1% |
| None | — | 0.77 | 57.0 | 3.55e-01 | 78.7% | 77.5% | |
| 3284305 | 7527.1.1.2 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › CoA_transf_3 | 0.76 | 56.0 | 3.63e-01 | 78.7% | 24.1% |
| 3962239 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.76 | 57.0 | 3.97e-01 | 80.3% | 31.3% |
| 4620379 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.76 | 56.0 | 4.09e-01 | 78.7% | 32.3% |
| 98832 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.75 | 55.0 | 3.38e-01 | 78.7% | 86.1% |
| 2482742 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.75 | 55.0 | 4.08e-01 | 78.7% | 36.1% |
| 3188070 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.75 | 55.0 | 3.47e-01 | 78.7% | 18.4% |
| 3609439 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.75 | 55.0 | 3.91e-01 | 78.7% | 32.8% |
| 5055199 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.74 | 55.0 | 3.87e-01 | 78.7% | 34.6% |
| 4854396 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.74 | 55.0 | 3.93e-01 | 78.7% | 32.2% |
| 3413126 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.74 | 54.0 | 4.00e-01 | 78.7% | 33.1% |
| 5014627 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.74 | 54.0 | 3.73e-01 | 78.7% | 28.6% |
| 4297292 | 2003.1.8.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › Mur_ligase | 0.74 | 54.0 | 4.46e-01 | 78.7% | 49.1% |
| 4981784 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.73 | 53.0 | 4.29e-01 | 77.0% | 46.1% |
| 4968388 | 2003.1.10.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › DUF1246 | 0.73 | 56.0 | 4.17e-01 | 82.0% | 45.3% |
| 4215068 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.73 | 54.0 | 4.25e-01 | 78.7% | 52.8% |
| 3971240 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.73 | 53.0 | 3.26e-01 | 78.7% | 61.1% |
| 3702718 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.73 | 53.0 | 3.63e-01 | 78.7% | 86.2% |
| 3952960 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.72 | 53.0 | 3.67e-01 | 78.7% | 33.5% |
| 4339836 | 2006.1.4.17 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 | 0.72 | 52.0 | 3.95e-01 | 77.0% | 33.1% |
| 2756225 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.72 | 53.0 | 3.81e-01 | 78.7% | 81.1% |
| 1309317 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.71 | 52.0 | 4.05e-01 | 78.7% | 45.5% |
| 5069917 | 2003.1.1.52 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › RmlD_sub_bind | 0.71 | 52.0 | 3.28e-01 | 77.0% | 17.2% |
| 4084757 | 2003.1.1.180 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF188 | 0.71 | 52.0 | 3.90e-01 | 78.7% | 34.7% |
| 4304222 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.70 | 54.0 | 3.72e-01 | 83.6% | 30.0% |
| 1096302 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.70 | 51.0 | 3.27e-01 | 78.7% | 19.5% |
| 4651573 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.69 | 50.0 | 3.73e-01 | 78.7% | 29.1% |
| 4021726 | 2003.1.10.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RS_preATP-grasp-like | 0.69 | 51.0 | 4.02e-01 | 78.7% | 44.8% |
| 3693334 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.68 | 51.0 | 3.44e-01 | 80.3% | 25.3% |
| 4865692 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.68 | 57.0 | 3.87e-01 | 98.4% | 50.4% |
| 4315670 | 2006.1.4.17 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF188 | 0.67 | 50.0 | 4.00e-01 | 80.3% | 41.6% |
| 3962331 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.67 | 49.0 | 3.63e-01 | 78.7% | 39.4% |
| 4071633 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.66 | 49.0 | 3.85e-01 | 78.7% | 53.1% |
| 4012834 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.66 | 48.0 | 3.53e-01 | 78.7% | 37.6% |
| 4150218 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.66 | 57.0 | 4.23e-01 | 100.0% | 37.5% |
| 3730138 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.65 | 52.0 | 3.32e-01 | 90.2% | 39.3% |
| 3588278 | 2003.1.8.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › PglD_N | 0.65 | 47.0 | 4.05e-01 | 78.7% | 49.0% |
| 2602038 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.65 | 47.0 | 3.78e-01 | 78.7% | 41.5% |
| 4989452 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.64 | 54.0 | 4.06e-01 | 100.0% | 84.7% |
| 5023291 | 2003.1.5.97 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_32 | 0.64 | 52.0 | 3.69e-01 | 96.7% | 83.1% |
| 4050311 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.64 | 49.0 | 3.49e-01 | 88.5% | 60.5% |
| 3282460 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.64 | 47.0 | 3.24e-01 | 82.0% | 73.5% |
| 1193403 | 7577.1.1.6 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 | 0.63 | 54.0 | 3.67e-01 | 100.0% | 50.6% |
| 4974380 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.63 | 51.0 | 3.59e-01 | 96.7% | 68.9% |
| 3510235 | 2003.1.5.95 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM13 | 0.63 | 52.0 | 3.37e-01 | 100.0% | 79.6% |
| 3689041 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 45.0 | 3.40e-01 | 78.7% | 32.3% |
| 1322981 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.61 | 51.0 | 4.07e-01 | 96.7% | 94.7% |
| 3860828 | 2003.1.5.107 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › AdoMet_MTase | 0.61 | 51.0 | 3.55e-01 | 100.0% | 83.0% |
| 4609993 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.60 | 48.0 | 3.51e-01 | 95.1% | 90.0% |
| 3618481 | 247.1.1.5 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,HAGH_C | 0.60 | 45.0 | 2.82e-01 | 83.6% | 19.0% |
| 1843721 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.58 | 50.0 | 3.24e-01 | 100.0% | 46.3% |
| 5028296 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.58 | 48.0 | 3.36e-01 | 98.4% | 51.7% |
| 3237026 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 42.0 | 2.91e-01 | 78.7% | 23.7% |
| 3687716 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.58 | 46.0 | 3.27e-01 | 96.7% | 71.7% |
| 4938906 | 2003.1.1.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 | 0.58 | 43.0 | 3.56e-01 | 85.2% | 99.2% |
| 4227398 | 2003.1.4.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2 | 0.56 | 41.0 | 3.00e-01 | 78.7% | 45.0% |
| 5020609 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.56 | 45.0 | 3.37e-01 | 90.2% | 82.6% |
| 3626582 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.56 | 47.0 | 3.32e-01 | 96.7% | 79.5% |
| 3087953 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 45.0 | 3.76e-01 | 96.7% | 84.6% |
| 4478057 | 2003.1.4.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2 | 0.55 | 47.0 | 3.55e-01 | 100.0% | 77.5% |
| 4597484 | 2003.1.4.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2 | 0.54 | 44.0 | 3.40e-01 | 100.0% | 74.5% |
| 3702595 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.54 | 40.0 | 2.93e-01 | 83.6% | 29.2% |
| 3263543 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.52 | 43.0 | 3.03e-01 | 93.4% | 91.3% |
D2
medium
residues 62-133
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ah5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 43.0 | 4.56e-01 | 97.2% | 86.2% |
| 3afhA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.58 | 38.0 | 4.44e-01 | 87.5% | 96.0% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 39.0 | 3.70e-01 | 98.6% | 60.9% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.54 | 47.0 | 3.54e-01 | 98.6% | 70.7% |
| 2gk9B01 | 3.30.800.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta | 0.53 | 44.0 | 3.46e-01 | 93.1% | 91.1% |
| 2a73B01 | 1.20.91.20 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) | 0.51 | 38.0 | 3.91e-01 | 90.3% | 84.3% |
| 7pjdC01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 40.0 | 3.19e-01 | 91.7% | 58.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945748 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.60 | 48.0 | 4.48e-01 | 90.3% | 94.7% |
| 4088605 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.59 | 50.0 | 3.47e-01 | 100.0% | 32.0% |
| 4879388 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.58 | 49.0 | 4.72e-01 | 100.0% | 87.4% |
| 3704289 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 48.0 | 4.66e-01 | 97.2% | 90.0% |
| 4950761 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.54 | 37.0 | 2.31e-01 | 72.2% | 16.2% |
| 3501406 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.54 | 45.0 | 3.83e-01 | 95.8% | 94.4% |
| 55657 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.53 | 42.0 | 3.99e-01 | 90.3% | 93.3% |
| 3500366 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.52 | 44.0 | 3.36e-01 | 100.0% | 48.1% |
| 3232086 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 35.0 | 3.27e-01 | 72.2% | 80.0% |
| 4107589 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.51 | 40.0 | 3.50e-01 | 87.5% | 61.7% |
| 4386119 | 102.1.1.42 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNAseD_HRDC_C | 0.51 | 42.0 | 4.29e-01 | 100.0% | 100.0% |