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MT708549.1__QOV06290.1__CPT_Maja_070__00070

Bact-Vir

MT708549.1__QOV06290.1__CPT_Maja_070__00070

Identity

Accession:
MT708549 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-67
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.89 74.0 6.21e-01 100.0% 56.6%
4kzsA02 6.10.140.1870 Special › Helix non-globular › Helix Hairpins › 0.86 77.0 6.99e-01 100.0% 74.3%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 80.0 7.51e-01 100.0% 90.6%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 78.0 7.43e-01 100.0% 87.1%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.82 77.0 6.27e-01 100.0% 62.6%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.82 77.0 5.44e-01 100.0% 37.2%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.82 76.0 6.28e-01 100.0% 63.3%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 70.0 6.67e-01 100.0% 81.0%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 67.0 5.77e-01 100.0% 58.8%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.80 74.0 4.86e-01 100.0% 27.9%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 71.0 6.95e-01 96.3% 91.4%
2qf9A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.80 72.0 5.03e-01 98.1% 35.9%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.80 69.0 5.33e-01 100.0% 45.5%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.79 67.0 4.83e-01 94.4% 76.0%
4p9tA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.77 67.0 5.20e-01 100.0% 45.0%
6cgaC02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 70.0 6.15e-01 100.0% 69.2%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.77 69.0 6.48e-01 100.0% 81.8%
4y9jA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.75 66.0 4.82e-01 100.0% 50.3%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 64.0 6.07e-01 100.0% 80.6%
3cwzB01 1.20.58.900 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain 0.74 65.0 4.72e-01 100.0% 65.8%
3pe0A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 57.0 4.65e-01 100.0% 45.3%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.71 59.0 4.60e-01 94.4% 77.0%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.71 64.0 5.31e-01 100.0% 63.4%
2x9xA04 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 57.0 5.75e-01 100.0% 90.7%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 56.0 4.88e-01 100.0% 55.4%
3zgxA02 6.10.140.1720 Special › Helix non-globular › Helix Hairpins › 0.70 60.0 5.09e-01 100.0% 58.2%
1yq1A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.70 61.0 4.84e-01 100.0% 50.0%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.70 59.0 5.16e-01 100.0% 64.7%
3d85C00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.69 60.0 4.55e-01 100.0% 66.9%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.68 54.0 5.34e-01 100.0% 81.0%
3tu3B03 1.20.1050.100 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 56.0 3.97e-01 92.6% 30.0%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.68 56.0 4.78e-01 100.0% 98.0%
4uyeA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.68 58.0 4.70e-01 100.0% 93.6%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.67 56.0 4.40e-01 100.0% 43.6%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.66 56.0 4.88e-01 100.0% 61.4%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.66 55.0 4.97e-01 100.0% 68.9%
3dkaB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.65 54.0 4.19e-01 100.0% 65.2%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.65 54.0 4.34e-01 96.3% 78.6%
3ay8A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 53.0 4.12e-01 100.0% 44.1%
2ra1A01 1.20.58.790 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 55.0 4.61e-01 100.0% 55.1%
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.63 56.0 4.23e-01 100.0% 53.0%
2kseA00 1.20.5.1040 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. 0.63 55.0 4.92e-01 100.0% 84.4%
5ulcX00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.63 52.0 4.13e-01 98.1% 86.1%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.61 46.0 4.65e-01 88.9% 84.9%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.61 51.0 4.13e-01 100.0% 47.0%
7vwtA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.61 51.0 3.23e-01 100.0% 46.3%
2gz4A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.61 55.0 3.69e-01 100.0% 65.0%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.61 48.0 4.01e-01 88.9% 70.1%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.60 55.0 5.41e-01 100.0% 96.5%
1e91A00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.60 46.0 4.03e-01 87.0% 95.3%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 50.0 4.18e-01 100.0% 58.8%
5c98A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.56 48.0 3.23e-01 100.0% 25.5%
2v4jA01 6.10.140.1420 Special › Helix non-globular › Helix Hairpins › 0.55 44.0 4.27e-01 100.0% 81.0%
1knzA01 6.10.280.20 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain 0.51 41.0 3.46e-01 94.4% 67.6%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3596042 4163.1.1.0 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.86 80.0 5.75e-01 100.0% 40.0%
3175197 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.85 75.0 5.48e-01 100.0% 39.2%
4950970 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 81.0 4.69e-01 100.0% 27.1%
2720300 192.22.1.1 alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd 0.84 75.0 7.74e-01 94.4% 100.0%
3783731 2004.1.1.505 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.84 79.0 4.55e-01 100.0% 13.8%
4674 192.7.1.1 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB 0.84 78.0 7.29e-01 100.0% 83.1%
3487846 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.84 78.0 5.53e-01 100.0% 39.3%
3702706 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.83 77.0 6.62e-01 100.0% 67.5%
4974110 3755.4.1.91 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › DUF7121 0.83 78.0 4.92e-01 100.0% 23.9%
3588172 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.82 77.0 5.37e-01 100.0% 36.0%
4962483 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.81 74.0 4.83e-01 98.1% 27.8%
3331533 3559.1.1.1 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 0.81 75.0 5.36e-01 100.0% 37.8%
4028334 2004.1.1.505 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.81 75.0 4.52e-01 100.0% 17.4%
3823336 4207.1.1.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.81 68.0 5.33e-01 100.0% 44.3%
3488181 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.80 70.0 5.22e-01 100.0% 40.8%
222003 133.1.1.1 alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.80 74.0 4.89e-01 100.0% 28.8%
3657504 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.80 76.0 5.41e-01 100.0% 40.0%
3625044 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.80 71.0 5.50e-01 100.0% 48.6%
3742115 9.26.1.0 beta barrels › Lipocalins/Streptavidin 0.79 69.0 4.70e-01 98.1% 28.4%
3238851 3812.1.1.0 alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE 0.79 73.0 5.73e-01 100.0% 51.4%
2555592 5069.1.1.3 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I 0.79 71.0 6.05e-01 100.0% 80.0%
4944942 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.79 71.0 6.30e-01 98.1% 74.7%
5041482 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.78 71.0 5.79e-01 100.0% 56.8%
3731364 3922.1.1.137 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › HisKA 0.78 70.0 6.62e-01 100.0% 87.7%
3386547 4168.1.1.0 alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.77 51.0 4.96e-01 100.0% 61.7%
5077926 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.77 68.0 5.01e-01 98.1% 39.3%
5012473 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.77 71.0 5.48e-01 100.0% 51.8%
3925160 9.26.1.0 beta barrels › Lipocalins/Streptavidin 0.76 65.0 4.44e-01 96.3% 27.4%
3269487 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.75 64.0 5.81e-01 98.1% 70.7%
3596938 4106.1.1.0 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack 0.75 66.0 4.31e-01 100.0% 25.8%
3704 601.1.1.1 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin 0.75 65.0 5.99e-01 100.0% 75.0%
3250543 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.75 67.0 5.28e-01 100.0% 53.6%
4883924 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.75 63.0 5.45e-01 90.7% 81.2%
3613914 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.73 63.0 5.70e-01 100.0% 72.0%
3231244 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.73 63.0 4.94e-01 100.0% 46.1%
3473158 109.62.1.0 alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain 0.72 63.0 3.92e-01 100.0% 21.6%
4317199 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.70 60.0 4.67e-01 100.0% 44.0%
3736652 192.29.1.102 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fung_rhodopsin 0.69 57.0 5.07e-01 100.0% 63.7%
3600869 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.69 62.0 4.79e-01 100.0% 69.6%
3718646 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 56.0 3.69e-01 100.0% 62.6%
3181688 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.69 56.0 4.30e-01 100.0% 39.2%
3402974 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 57.0 4.21e-01 100.0% 34.8%
4176828 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.67 59.0 5.43e-01 100.0% 81.4%
3673285 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.67 60.0 4.82e-01 100.0% 52.4%
4940379 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.66 49.0 3.94e-01 100.0% 39.1%
3277618 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 53.0 4.93e-01 100.0% 72.0%
3415522 4082.1.1.1 alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange 0.64 51.0 4.83e-01 88.9% 80.0%
3679571 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.64 52.0 3.37e-01 100.0% 18.0%
3245015 3831.1.1.0 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 0.61 52.0 4.56e-01 96.3% 63.7%
4161290 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.58 44.0 3.46e-01 83.3% 39.1%
3250679 3559.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 0.58 48.0 3.45e-01 100.0% 33.1%