←Back to structures
MT711889.1__QNJ57449.1__X__00018
Bact-VirMT711889.1__QNJ57449.1__X__00018
Identity
- Accession:
- MT711889 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Waldovirus›
Pseudomonas_phage_Waldo5
TaxID: 2762290
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.81 | 45.0 | 4.19e-01 | 83.8% | 44.7% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 67.0 | 4.93e-01 | 94.1% | 49.0% |
| 5u1aL00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 55.0 | 4.06e-01 | 82.4% | 57.2% |
| 1htjF00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.67 | 41.0 | 3.00e-01 | 75.0% | 23.1% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 44.0 | 3.69e-01 | 75.0% | 56.6% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.60 | 41.0 | 3.93e-01 | 70.6% | 62.0% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 42.0 | 3.35e-01 | 79.4% | 35.6% |
| 7wboA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 43.0 | 3.17e-01 | 77.9% | 66.7% |
| 3t34A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 2.90e-01 | 92.6% | 35.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228717 | 103.4.1.1 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX | 0.86 | 61.0 | 5.88e-01 | 73.5% | 66.7% |
| 3999255 | 5050.1.1.4 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nucleoside_tran | 0.84 | 62.0 | 4.15e-01 | 79.4% | 21.6% |
| 4402607 | 605.1.1.142 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HWE_HK | 0.83 | 64.0 | 6.78e-01 | 82.4% | 95.0% |
| 3387239 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 70.0 | 5.62e-01 | 97.1% | 58.3% |
| 3875941 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.73 | 61.0 | 4.52e-01 | 89.7% | 80.0% |
| 3177223 | 148.1.3.346 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF29718 | 0.69 | 49.0 | 4.73e-01 | 82.4% | 66.7% |
| 3617518 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.63 | 46.0 | 4.60e-01 | 76.5% | 87.1% |
| 3743434 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.63 | 44.0 | 2.86e-01 | 80.9% | 17.5% |
| 3582200 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.60 | 41.0 | 4.14e-01 | 72.1% | 87.1% |