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MT711889.1__QNJ57461.1__X__00030
Bact-VirMT711889.1__QNJ57461.1__X__00030
Identity
- Accession:
- MT711889 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Waldovirus›
Pseudomonas_phage_Waldo5
TaxID: 2762290
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-129
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 52.0 | 5.57e-01 | 96.2% | 97.0% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 50.0 | 5.41e-01 | 91.1% | 95.3% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 47.0 | 4.87e-01 | 97.5% | 81.3% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 4.60e-01 | 100.0% | 59.8% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 4.55e-01 | 100.0% | 70.9% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 42.0 | 4.59e-01 | 87.3% | 88.7% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 5.22e-01 | 96.2% | 98.6% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 44.0 | 4.60e-01 | 98.7% | 88.6% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 38.0 | 4.22e-01 | 89.9% | 86.4% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.10e-01 | 100.0% | 54.5% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.58 | 48.0 | 4.99e-01 | 96.2% | 95.9% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.57 | 44.0 | 4.53e-01 | 100.0% | 89.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.29e-01 | 97.5% | 87.0% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.54 | 43.0 | 4.18e-01 | 100.0% | 77.4% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 38.0 | 3.38e-01 | 77.2% | 74.2% |
| 2l2fA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.53 | 47.0 | 4.24e-01 | 100.0% | 89.8% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.82e-01 | 96.2% | 91.4% |
| 1amiA04 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.53 | 42.0 | 3.16e-01 | 91.1% | 83.3% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 4.12e-01 | 100.0% | 95.4% |
| 3by8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 42.0 | 3.57e-01 | 93.7% | 91.7% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.69 | 50.0 | 5.03e-01 | 91.1% | 75.0% |
| 4303967 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 58.0 | 5.52e-01 | 89.9% | 90.0% |
| 3926120 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.67 | 49.0 | 4.02e-01 | 97.5% | 42.1% |
| 4588126 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 5.10e-01 | 84.8% | 86.5% |
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.65 | 47.0 | 4.87e-01 | 97.5% | 81.3% |
| 4851967 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.63 | 45.0 | 4.96e-01 | 97.5% | 95.2% |
| 2674741 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.63 | 41.0 | 4.58e-01 | 94.9% | 96.4% |
| 3503332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 5.23e-01 | 88.6% | 100.0% |
| 3934278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 50.0 | 4.45e-01 | 98.7% | 60.9% |
| 4423306 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.62 | 42.0 | 4.32e-01 | 94.9% | 74.7% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.43e-01 | 100.0% | 63.6% |
| 5061147 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.78e-01 | 100.0% | 75.8% |
| 4068131 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.61 | 40.0 | 3.84e-01 | 93.7% | 56.8% |
| 3297966 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.61 | 53.0 | 4.66e-01 | 100.0% | 85.8% |
| 3839369 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.60 | 42.0 | 4.25e-01 | 97.5% | 73.8% |
| 4077893 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 40.0 | 2.43e-01 | 93.7% | 10.2% |
| 3546727 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 51.0 | 4.63e-01 | 94.9% | 71.3% |
| 4547406 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.59 | 40.0 | 4.06e-01 | 96.2% | 70.0% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.59 | 53.0 | 4.64e-01 | 100.0% | 71.7% |
| 3784770 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 50.0 | 5.11e-01 | 97.5% | 96.0% |
| 5013239 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.59 | 44.0 | 3.98e-01 | 81.0% | 95.5% |
| 3167531 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.59 | 49.0 | 4.15e-01 | 100.0% | 54.1% |
| 4031151 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.59 | 43.0 | 4.39e-01 | 89.9% | 81.3% |
| 3969959 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.47e-01 | 96.2% | 80.0% |
| 3504767 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.56 | 38.0 | 4.05e-01 | 70.9% | 80.0% |
| 3284813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 48.0 | 4.89e-01 | 96.2% | 98.7% |
| 3371134 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 50.0 | 4.37e-01 | 100.0% | 70.8% |
| 4522783 | 101.1.2.715 ↗ | alpha arrays › HTH › HTH › winged helix domain › CheF-arch | 0.56 | 43.0 | 3.03e-01 | 86.1% | 35.4% |
| 4946993 | 4.1.1.479 ↗ | beta barrels › SH3 › SH3 › SH3 › eIF-5a | 0.56 | 40.0 | 4.19e-01 | 97.5% | 84.3% |
| 3643549 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.56 | 39.0 | 3.94e-01 | 97.5% | 73.8% |
| 4968862 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 32.0 | 3.88e-01 | 84.8% | 100.0% |
| 3650798 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 50.0 | 4.37e-01 | 100.0% | 72.2% |
| 3925595 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.55 | 46.0 | 3.20e-01 | 96.2% | 48.4% |
| 3483489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.08e-01 | 97.5% | 80.0% |
| 3454149 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.54 | 46.0 | 3.95e-01 | 100.0% | 67.4% |
| 4930437 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.54 | 40.0 | 3.71e-01 | 81.0% | 66.7% |
| 3621734 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.54 | 42.0 | 3.76e-01 | 88.6% | 80.0% |
| 5007104 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.53 | 39.0 | 3.68e-01 | 82.3% | 90.5% |
| 5016315 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.53 | 44.0 | 3.77e-01 | 91.1% | 77.6% |
| 5002490 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.53 | 43.0 | 2.74e-01 | 100.0% | 17.9% |
| 4931072 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.53 | 37.0 | 3.88e-01 | 96.2% | 84.3% |
| 3411238 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.52 | 44.0 | 3.09e-01 | 96.2% | 41.4% |
| 3400280 | 5.1.3.99 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP_3 | 0.51 | 44.0 | 2.85e-01 | 98.7% | 28.9% |
| 3728259 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.51 | 36.0 | 3.21e-01 | 75.9% | 93.6% |
| 3260028 | 220.1.1.9 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs | 0.51 | 38.0 | 3.42e-01 | 83.5% | 75.8% |
| 4996174 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.50 | 43.0 | 3.56e-01 | 100.0% | 62.6% |
| 5025236 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.50 | 44.0 | 3.81e-01 | 100.0% | 75.2% |
| 3677761 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.50 | 43.0 | 3.80e-01 | 100.0% | 76.0% |