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MT713136.1__QMV28956.1__AP1_0249__00238

Bact-Vir

MT713136.1__QMV28956.1__AP1_0249__00238

Identity

Accession:
MT713136 ↗
Kingdom:
phage

Quality

47.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Ceceduovirus› Aeromonas_phage_AP1

TaxID: 2759193

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-63
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.79 61.0 4.28e-01 82.5% 28.9%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 50.0 5.03e-01 87.7% 74.1%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 55.0 4.81e-01 87.7% 97.7%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.67 51.0 4.87e-01 80.7% 75.4%
3mq0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.99e-01 93.0% 81.8%
4akgA06 1.10.8.710 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain 0.66 47.0 3.85e-01 77.2% 82.2%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 56.0 4.88e-01 98.2% 97.6%
4hojA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 49.0 4.08e-01 94.7% 57.3%
7vkcA01 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.55 46.0 3.31e-01 93.0% 82.4%
3u4qB04 6.10.140.1030 Special › Helix non-globular › Helix Hairpins › 0.52 39.0 3.71e-01 82.5% 73.9%
1beoA00 1.10.239.10 Mainly Alpha › Orthogonal Bundle › Beta-cryptogein › Elicitin domain 0.52 39.0 3.28e-01 80.7% 77.6%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3868366 325.1.7.19 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Rrp15p 0.86 66.0 6.27e-01 82.5% 70.8%
4870601 3016.1.1.5 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SHMT 0.76 54.0 4.48e-01 75.4% 48.0%
137167 101.1.2.230 ↗ alpha arrays › HTH › HTH › winged helix domain › PSV_trans_reg_dom 0.71 57.0 4.96e-01 89.5% 97.7%
4934175 150.1.1.3 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.70 51.0 3.77e-01 86.0% 31.4%
3489175 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 53.0 4.88e-01 89.5% 100.0%
2914508 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.64 55.0 3.44e-01 93.0% 18.7%
3617842 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.63 44.0 4.01e-01 75.4% 55.0%
3613648 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.56 46.0 3.58e-01 89.5% 70.0%
3929647 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.56 44.0 4.01e-01 89.5% 72.5%
3257258 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 43.0 3.66e-01 93.0% 60.0%
D2 high residues 82-223
PDB
D3 medium residues 299-343
PDB
D4 medium residues 344-465
PDB