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MT713136.1__QMV29101.1__AP1_0394__00383
Bact-VirMT713136.1__QMV29101.1__AP1_0394__00383
Identity
- Accession:
- MT713136 ↗
- Kingdom:
- phage
Quality
61.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ceceduovirus›
Aeromonas_phage_AP1
TaxID: 2759193
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-78
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.59 | 40.0 | 2.87e-01 | 88.1% | 23.2% |
| 3cb6A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 42.0 | 2.95e-01 | 97.0% | 71.4% |
| 7d8gA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.50 | 36.0 | 2.77e-01 | 85.1% | 31.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4985368 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.69 | 36.0 | 3.87e-01 | 74.6% | 56.7% |
| 3990001 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.61 | 31.0 | 3.39e-01 | 92.5% | 54.7% |
| 5030664 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 37.0 | 3.25e-01 | 71.6% | 69.0% |
| 409389 | 11.1.1.870 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26918 | 0.53 | 38.0 | 3.37e-01 | 86.6% | 52.6% |
| 4171800 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.53 | 29.0 | 2.76e-01 | 91.0% | 42.5% |
| 3244177 | 11.1.1.934 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N, Arrestin_C | 0.53 | 41.0 | 2.65e-01 | 86.6% | 89.4% |
| 3560202 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 42.0 | 2.66e-01 | 91.0% | 32.6% |
| 3453303 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.51 | 35.0 | 2.80e-01 | 80.6% | 32.0% |
| 5014177 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.51 | 36.0 | 2.84e-01 | 83.6% | 31.5% |
| 3266722 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 34.0 | 3.25e-01 | 88.1% | 58.7% |
D2
medium
residues 79-148
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rckA01 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.66 | 47.0 | 3.32e-01 | 75.7% | 73.4% |
| 1xx7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 48.0 | 3.67e-01 | 87.1% | 67.4% |
D3
medium
residues 149-204