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MT723933.1__QNJ57612.1__SEA_KEANU_6__00006
Bact-VirMT723933.1__QNJ57612.1__SEA_KEANU_6__00006
Identity
- Accession:
- MT723933 ↗
- Kingdom:
- phage
Quality
64.1
mean pLDDT
Taxonomy
TaxID: 2762406
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 162-241
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.75 | 50.0 | 5.07e-01 | 72.5% | 69.6% |
| 3a52A02 | 1.10.60.40 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › | 0.65 | 39.0 | 3.84e-01 | 73.8% | 56.5% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.65 | 49.0 | 4.25e-01 | 81.2% | 53.2% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.65 | 47.0 | 4.56e-01 | 76.2% | 84.1% |
| 6h7bA01 | 1.10.1900.10 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein | 0.64 | 52.0 | 5.35e-01 | 87.5% | 94.6% |
| 2a7oA00 | 1.10.1740.100 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain | 0.64 | 50.0 | 4.76e-01 | 88.7% | 98.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 46.0 | 4.25e-01 | 78.8% | 65.0% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.61 | 31.0 | 3.28e-01 | 77.5% | 55.7% |
| 1o5wA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 41.0 | 3.10e-01 | 72.5% | 91.9% |
| 1aa6A03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.57 | 41.0 | 3.14e-01 | 76.2% | 95.9% |
| 5dqqA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 42.0 | 3.59e-01 | 77.5% | 73.5% |
| 1e94E03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 41.0 | 3.77e-01 | 76.2% | 82.1% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.56 | 38.0 | 3.00e-01 | 71.2% | 50.0% |
| 6e1kA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 43.0 | 3.92e-01 | 86.3% | 60.7% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.53 | 39.0 | 4.23e-01 | 76.2% | 100.0% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.53 | 42.0 | 3.91e-01 | 82.5% | 68.8% |
| 3lstA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 2.86e-01 | 85.0% | 79.4% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.50 | 34.0 | 3.35e-01 | 70.0% | 93.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928496 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.69 | 49.0 | 5.51e-01 | 82.5% | 100.0% |
| 5014639 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.67 | 51.0 | 4.72e-01 | 80.0% | 96.0% |
| 5051886 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.61 | 42.0 | 4.28e-01 | 82.5% | 71.2% |
| 5028461 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.60 | 45.0 | 4.39e-01 | 80.0% | 86.7% |
| 4365789 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.60 | 46.0 | 4.41e-01 | 80.0% | 86.7% |
| 4932863 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.56 | 46.0 | 4.64e-01 | 87.5% | 91.3% |
| 5012117 | 7523.1.1.11 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth | 0.52 | 39.0 | 2.71e-01 | 81.2% | 84.7% |
| None | — | 0.52 | 41.0 | 2.88e-01 | 85.0% | 45.9% |