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MT732457.1__QQV90431.1__Harreka1_24__00024

Bact-Vir

MT732457.1__QQV90431.1__Harreka1_24__00024

Identity

Accession:
MT732457 ↗
Kingdom:
phage

Quality

92.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-89
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08299.18 best Bac_DnaA_C 45.8 7.20e-12 73.6% 71.0%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.93 89.0 8.61e-01 100.0% 96.8%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 49.0 6.17e-01 73.6% 96.3%
1l8qA03 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.82 76.0 7.04e-01 100.0% 83.2%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 43.0 4.99e-01 70.1% 75.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 43.0 5.04e-01 78.2% 96.4%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 36.0 4.58e-01 73.6% 90.0%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 40.0 4.80e-01 75.9% 96.4%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.64 45.0 4.31e-01 78.2% 63.4%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.50e-01 85.1% 77.5%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.62 50.0 4.25e-01 86.2% 91.5%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 37.0 4.14e-01 80.5% 80.3%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.31e-01 79.3% 75.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 4.49e-01 72.4% 98.6%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.59e-01 73.6% 60.0%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.65e-01 75.9% 56.7%
2es9A00 1.20.1290.30 Mainly Alpha › Up-down Bundle › AhpD-like › 0.58 49.0 4.79e-01 100.0% 96.0%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.57 39.0 4.17e-01 100.0% 81.6%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 4.37e-01 74.7% 100.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.77e-01 70.1% 74.5%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 45.0 4.45e-01 87.4% 81.9%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.56 45.0 3.91e-01 89.7% 97.2%
1zc6A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 40.0 3.31e-01 74.7% 89.1%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.40e-01 75.9% 55.5%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 4.26e-01 70.1% 98.4%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 4.06e-01 71.3% 95.9%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 4.03e-01 70.1% 98.6%
4mo7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 42.0 3.65e-01 83.9% 83.1%
3ccyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 40.0 3.45e-01 79.3% 81.0%
2hyjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 40.0 3.43e-01 78.2% 85.0%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 4.24e-01 75.9% 97.2%
2iaiA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 40.0 3.56e-01 80.5% 91.2%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 4.20e-01 72.4% 98.4%
1wtyA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.54 39.0 3.57e-01 75.9% 73.3%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.71e-01 70.1% 75.6%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.38e-01 75.9% 70.5%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.47e-01 80.5% 58.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 42.0 4.06e-01 100.0% 74.8%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 4.06e-01 72.4% 96.9%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.89e-01 71.3% 100.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.43e-01 89.7% 60.9%
5x56B00 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.50 40.0 3.72e-01 83.9% 70.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.68e-01 95.4% 69.3%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4051624 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 90.0 8.34e-01 100.0% 86.7%
4146099 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 88.0 8.55e-01 100.0% 98.9%
4106860 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 88.0 8.55e-01 100.0% 95.8%
4270831 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.93 88.0 8.14e-01 100.0% 86.7%
4559046 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 87.0 8.10e-01 100.0% 86.7%
4281674 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 87.0 8.10e-01 100.0% 86.7%
4266587 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 87.0 8.39e-01 100.0% 94.7%
4102935 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 86.0 8.04e-01 100.0% 86.7%
4174198 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 86.0 8.14e-01 100.0% 91.0%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 85.0 7.93e-01 100.0% 86.7%
4601417 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 85.0 8.22e-01 100.0% 95.8%
4379676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 84.0 7.86e-01 100.0% 88.6%
4125972 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 83.0 7.89e-01 98.9% 90.0%
4524648 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 84.0 7.79e-01 100.0% 86.7%
4529157 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.89 83.0 8.20e-01 98.9% 100.0%
3385990 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.89 83.0 7.78e-01 100.0% 86.7%
4606821 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.89 83.0 7.90e-01 100.0% 94.0%
4346134 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.88 83.0 7.72e-01 100.0% 87.5%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.88 82.0 7.96e-01 100.0% 95.8%
4604979 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.88 82.0 7.64e-01 100.0% 86.5%
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 80.0 7.96e-01 98.9% 100.0%
4165809 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 77.0 7.77e-01 94.3% 100.0%
3512259 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.87 80.0 7.47e-01 100.0% 97.1%
4067934 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 78.0 7.75e-01 96.6% 98.9%
4437729 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 79.0 7.55e-01 100.0% 90.0%
4606105 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 79.0 7.50e-01 98.9% 90.0%
4102958 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.83 50.0 5.74e-01 71.3% 81.5%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.82 50.0 5.71e-01 73.6% 81.5%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.79 58.0 5.15e-01 77.0% 56.7%
3180778 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.77 48.0 5.46e-01 73.6% 84.6%
4998511 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.76 57.0 5.54e-01 78.2% 74.7%
4958294 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 49.0 5.72e-01 77.0% 100.0%
4958364 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 53.0 5.19e-01 83.9% 71.6%
5057202 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.69 47.0 5.18e-01 77.0% 87.1%
4458965 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.68 48.0 5.03e-01 77.0% 81.2%
3376425 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.67 48.0 4.90e-01 74.7% 83.5%
4980028 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.67 52.0 5.42e-01 81.6% 96.2%
4967690 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 38.0 4.87e-01 72.4% 100.0%
5007495 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.65 57.0 5.09e-01 97.7% 90.4%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 46.0 5.06e-01 73.6% 91.4%
4964807 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.65 38.0 4.62e-01 79.3% 92.7%
4989143 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 56.0 5.18e-01 96.6% 100.0%
4391758 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.64 43.0 4.21e-01 73.6% 63.2%
3908686 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 49.0 4.60e-01 82.8% 92.4%
5058606 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.76e-01 85.1% 85.3%
5046351 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.62 42.0 4.37e-01 70.1% 75.0%
3961604 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.62 45.0 4.34e-01 75.9% 99.0%
5081088 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.62 46.0 4.75e-01 79.3% 88.0%
5073261 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.62 42.0 4.61e-01 72.4% 87.1%
4061597 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.60 44.0 4.53e-01 82.8% 78.8%
3953807 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.59 47.0 3.83e-01 85.1% 87.9%
5039088 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.59 42.0 3.60e-01 74.7% 55.9%
5060818 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 45.0 4.81e-01 79.3% 92.0%
3587729 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 4.57e-01 80.5% 89.4%
4081576 101.1.6.1 alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.59 44.0 4.32e-01 80.5% 76.8%
3389698 2484.1.1.120 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 0.58 51.0 3.49e-01 98.9% 86.9%
3926197 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 43.0 4.01e-01 80.5% 82.7%
4556247 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 49.0 3.51e-01 93.1% 97.6%
5000679 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.56 48.0 4.51e-01 97.7% 83.6%
5047331 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 38.0 3.83e-01 74.7% 68.9%
3961207 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.53 38.0 4.03e-01 74.7% 94.7%
5050984 180.1.1.0 alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase 0.52 45.0 3.75e-01 100.0% 63.0%
3424337 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.52 41.0 4.29e-01 96.6% 93.8%
135020 101.1.20.1 alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD 0.51 39.0 3.47e-01 82.8% 88.5%
5035255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.93e-01 87.4% 88.4%
3994891 5073.1.1.7 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › PhoLip_ATPase_C 0.51 45.0 2.88e-01 100.0% 49.7%
5018467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.98e-01 88.5% 95.7%
3453885 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.50 43.0 3.77e-01 97.7% 63.7%
3198374 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.50 42.0 2.71e-01 95.4% 29.8%
166543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.50 41.0 3.43e-01 89.7% 60.5%