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MT732457.1__QQV90473.1__Harreka1_66__00066
Bact-VirMT732457.1__QQV90473.1__Harreka1_66__00066
Identity
- Accession:
- MT732457 ↗
- Kingdom:
- phage
Quality
96.1
mean pLDDT
Taxonomy
TaxID: 2745673
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-58
Domain cluster:
rep: H2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00077__D27-78
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 60.0 | 4.98e-01 | 100.0% | 52.8% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 61.0 | 5.58e-01 | 100.0% | 86.6% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.55e-01 | 100.0% | 96.9% |
| 7r3mA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.13e-01 | 100.0% | 69.5% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.68 | 53.0 | 5.15e-01 | 100.0% | 76.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 54.0 | 5.04e-01 | 100.0% | 70.3% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 59.0 | 5.23e-01 | 100.0% | 82.7% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 60.0 | 5.48e-01 | 100.0% | 79.4% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 59.0 | 5.53e-01 | 100.0% | 89.1% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 58.0 | 5.74e-01 | 100.0% | 98.2% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 58.0 | 5.03e-01 | 100.0% | 67.5% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 54.0 | 5.58e-01 | 96.1% | 100.0% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 56.0 | 5.31e-01 | 100.0% | 88.9% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 57.0 | 5.54e-01 | 100.0% | 93.0% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 44.0 | 4.34e-01 | 76.5% | 85.2% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.63e-01 | 100.0% | 76.7% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 5.13e-01 | 100.0% | 96.2% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 42.0 | 3.21e-01 | 76.5% | 57.0% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 50.0 | 4.80e-01 | 100.0% | 88.7% |
| 2k5qA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.60 | 42.0 | 3.46e-01 | 78.4% | 70.5% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 49.0 | 4.50e-01 | 100.0% | 80.8% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 42.0 | 4.03e-01 | 80.4% | 83.6% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.56 | 44.0 | 4.47e-01 | 100.0% | 92.3% |
| 4hc5D00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 44.0 | 3.36e-01 | 88.2% | 76.3% |
| 4paaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 41.0 | 2.85e-01 | 98.0% | 55.1% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 39.0 | 3.52e-01 | 84.3% | 87.8% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.23e-01 | 100.0% | 37.7% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.95e-01 | 100.0% | 89.8% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 38.0 | 2.68e-01 | 86.3% | 82.9% |
| 3ab1B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.84e-01 | 96.1% | 50.5% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 40.0 | 2.93e-01 | 88.2% | 64.5% |
| 3e5dA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 41.0 | 3.18e-01 | 90.2% | 84.0% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 34.0 | 3.25e-01 | 70.6% | 86.4% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.52 | 42.0 | 3.08e-01 | 100.0% | 64.1% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 38.0 | 2.94e-01 | 86.3% | 60.4% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 41.0 | 4.02e-01 | 100.0% | 85.0% |
| 3e8tA00 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.51 | 39.0 | 2.75e-01 | 94.1% | 87.0% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.51 | 40.0 | 3.94e-01 | 94.1% | 100.0% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.50 | 36.0 | 3.19e-01 | 86.3% | 76.3% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4053957 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.77 | 59.0 | 5.96e-01 | 100.0% | 84.0% |
| 3583597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 61.0 | 5.08e-01 | 100.0% | 50.0% |
| 4432330 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.76 | 58.0 | 5.86e-01 | 100.0% | 84.0% |
| 5004050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 59.0 | 5.35e-01 | 100.0% | 62.9% |
| 3991244 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.75 | 58.0 | 6.06e-01 | 100.0% | 95.6% |
| 4105348 | 4.1.1.394 ↗ | beta barrels › SH3 › SH3 › SH3 › SlpA | 0.74 | 64.0 | 5.93e-01 | 98.0% | 98.4% |
| 4627221 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.73 | 54.0 | 4.98e-01 | 100.0% | 63.1% |
| 4116754 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.72 | 53.0 | 5.55e-01 | 100.0% | 91.1% |
| 3785900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 63.0 | 3.66e-01 | 100.0% | 15.1% |
| 4091379 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 62.0 | 5.61e-01 | 100.0% | 78.6% |
| 3603847 | 4.1.1.144 ↗ | beta barrels › SH3 › SH3 › SH3 › Ago_PAZ_arc | 0.70 | 62.0 | 4.97e-01 | 100.0% | 74.0% |
| 4014809 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.69 | 49.0 | 4.58e-01 | 76.5% | 73.8% |
| 3581696 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 51.0 | 5.14e-01 | 100.0% | 84.0% |
| 3276044 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.68 | 61.0 | 3.60e-01 | 100.0% | 16.1% |
| 3389584 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 5.03e-01 | 100.0% | 67.1% |
| 4467360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 57.0 | 5.42e-01 | 100.0% | 81.7% |
| 3487686 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 5.04e-01 | 100.0% | 63.5% |
| 3713629 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.68 | 59.0 | 3.47e-01 | 100.0% | 23.3% |
| 436188 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.68 | 59.0 | 5.45e-01 | 100.0% | 85.1% |
| 3554994 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 59.0 | 4.91e-01 | 100.0% | 62.9% |
| 3928985 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 58.0 | 4.87e-01 | 100.0% | 65.6% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.67 | 60.0 | 5.24e-01 | 100.0% | 82.7% |
| 3771628 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.66 | 58.0 | 3.55e-01 | 100.0% | 18.4% |
| 3527248 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 58.0 | 5.23e-01 | 100.0% | 81.4% |
| 3365104 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.66 | 58.0 | 5.37e-01 | 100.0% | 86.2% |
| 3623786 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 58.0 | 5.38e-01 | 100.0% | 81.5% |
| 3599084 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.66 | 57.0 | 3.89e-01 | 100.0% | 58.4% |
| 3756676 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.66 | 58.0 | 4.66e-01 | 100.0% | 63.0% |
| 3523046 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 58.0 | 4.88e-01 | 100.0% | 62.4% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 57.0 | 5.03e-01 | 100.0% | 80.0% |
| 3366511 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.65 | 56.0 | 5.19e-01 | 98.0% | 81.5% |
| 3933788 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 56.0 | 5.31e-01 | 100.0% | 83.3% |
| 3460551 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.63 | 45.0 | 4.13e-01 | 78.4% | 72.9% |
| 3925471 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 46.0 | 4.43e-01 | 82.4% | 73.3% |
| 4937731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 4.61e-01 | 100.0% | 75.0% |
| 3362766 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.60 | 43.0 | 4.39e-01 | 100.0% | 78.0% |
| 4948758 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.59 | 40.0 | 3.75e-01 | 72.5% | 100.0% |
| 3731599 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.58 | 47.0 | 3.03e-01 | 96.1% | 53.6% |
| 3554209 | 6148.1.1.1 ↗ | few secondary structure elements › N-terminal domain of EpCAM › N-terminal domain of EpCAM › N-terminal domain of EpCAM › EpCAM_N | 0.58 | 38.0 | 4.10e-01 | 98.0% | 87.5% |
| 3354076 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.58 | 42.0 | 3.29e-01 | 100.0% | 33.1% |
| 4962507 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.57 | 40.0 | 3.73e-01 | 94.1% | 60.3% |
| 5082388 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 47.0 | 3.54e-01 | 98.0% | 74.8% |
| 4238585 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.56 | 46.0 | 4.61e-01 | 100.0% | 96.3% |
| 3888226 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.56 | 46.0 | 4.17e-01 | 100.0% | 72.0% |
| 168811 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.55 | 38.0 | 3.58e-01 | 92.2% | 58.5% |
| 3228875 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 34.0 | 3.42e-01 | 100.0% | 58.2% |
| 3514043 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 42.0 | 3.90e-01 | 100.0% | 73.3% |
| 3496964 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.53 | 39.0 | 3.09e-01 | 86.3% | 44.8% |
| 4278911 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.52 | 39.0 | 3.96e-01 | 98.0% | 92.0% |
| 5038213 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.52 | 41.0 | 4.18e-01 | 98.0% | 98.0% |
| 3907533 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.52 | 34.0 | 3.62e-01 | 92.2% | 87.5% |
| 4031789 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.51 | 40.0 | 3.90e-01 | 92.2% | 93.3% |
| 3195743 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 41.0 | 2.82e-01 | 100.0% | 92.4% |
| 3447078 | 825.1.1.0 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins | 0.51 | 42.0 | 2.97e-01 | 100.0% | 49.7% |
| 4876264 | 275.1.1.4 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_5 | 0.51 | 40.0 | 2.61e-01 | 94.1% | 19.9% |
| 3393809 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.50 | 38.0 | 2.73e-01 | 94.1% | 99.5% |