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MT732473.1__QQV91382.1__Leef1_19__00019
Bact-VirMT732473.1__QQV91382.1__Leef1_19__00019
Identity
- Accession:
- MT732473 ↗
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Taxonomy
TaxID: 2745684
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-86
Domain cluster:
rep: NC_062749.1__YP_010356968.1__M1M27_gp17__00017__D4-83
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 45.0 | 4.32e-01 | 90.4% | 53.1% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 53.0 | 5.59e-01 | 81.9% | 93.1% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 46.0 | 4.81e-01 | 88.0% | 75.3% |
| 3rrkA02 | 1.20.1460.20 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › | 0.68 | 49.0 | 3.91e-01 | 100.0% | 40.0% |
| 2g80A02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.65 | 51.0 | 5.21e-01 | 84.3% | 98.7% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 42.0 | 3.74e-01 | 79.5% | 48.3% |
| 2g7sA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 40.0 | 3.00e-01 | 95.2% | 28.4% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 45.0 | 3.96e-01 | 78.3% | 86.9% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.61 | 39.0 | 3.75e-01 | 94.0% | 57.3% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 49.0 | 4.48e-01 | 86.7% | 77.4% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.58 | 40.0 | 3.80e-01 | 72.3% | 100.0% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 52.0 | 4.57e-01 | 100.0% | 85.6% |
| 4al0A00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.57 | 48.0 | 3.97e-01 | 92.8% | 53.4% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.55 | 38.0 | 3.89e-01 | 88.0% | 75.6% |
| 1oksA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.55 | 33.0 | 4.09e-01 | 86.7% | 96.2% |
| 3u4qA02 | 1.10.274.50 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.54 | 38.0 | 3.08e-01 | 73.5% | 60.7% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.53 | 39.0 | 3.97e-01 | 79.5% | 98.7% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 42.0 | 3.71e-01 | 89.2% | 75.6% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.51 | 38.0 | 3.93e-01 | 85.5% | 84.2% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 42.0 | 3.57e-01 | 94.0% | 98.6% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 37.0 | 3.88e-01 | 77.1% | 97.2% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.50 | 44.0 | 3.60e-01 | 98.8% | 75.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008764 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.75 | 54.0 | 5.44e-01 | 75.9% | 84.7% |
| 3285506 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 57.0 | 5.29e-01 | 88.0% | 69.5% |
| 3770218 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.70 | 60.0 | 5.61e-01 | 95.2% | 77.7% |
| 4626247 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.69 | 54.0 | 3.95e-01 | 84.3% | 39.6% |
| 3518121 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.68 | 54.0 | 4.90e-01 | 86.7% | 62.6% |
| 3980119 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.66 | 42.0 | 4.52e-01 | 77.1% | 77.1% |
| 3940761 | 108.1.1.1 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 | 0.62 | 43.0 | 3.87e-01 | 71.1% | 84.3% |
| 4291138 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.61 | 45.0 | 3.98e-01 | 90.4% | 52.0% |
| 3535889 | 110.1.1.4 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › PYRIN | 0.61 | 47.0 | 4.66e-01 | 84.3% | 78.9% |
| 4992660 | 139.2.1.7 ↗ | few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif › Multi-haem_cyto | 0.59 | 53.0 | 3.37e-01 | 100.0% | 42.9% |
| 3431770 | 148.1.3.180 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › zf-RVT | 0.58 | 48.0 | 3.99e-01 | 91.6% | 86.0% |
| 3228202 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.58 | 42.0 | 3.40e-01 | 74.7% | 78.0% |
| 3646157 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.58 | 48.0 | 3.84e-01 | 90.4% | 69.7% |
| 3989535 | 632.6.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit | 0.58 | 51.0 | 4.85e-01 | 95.2% | 86.3% |
| 3713784 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.57 | 45.0 | 4.46e-01 | 89.2% | 82.4% |
| 4956322 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.56 | 45.0 | 3.39e-01 | 90.4% | 41.4% |
| 4522200 | 3684.1.1.1 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 | 0.55 | 48.0 | 4.81e-01 | 94.0% | 94.1% |
| 3741792 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.55 | 33.0 | 3.50e-01 | 72.3% | 65.3% |
| 3515204 | 4156.1.1.11 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N | 0.55 | 42.0 | 3.05e-01 | 80.7% | 43.8% |
| 5053993 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.55 | 46.0 | 4.35e-01 | 96.4% | 76.8% |
| 4619760 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.55 | 44.0 | 3.24e-01 | 90.4% | 84.2% |
| 4986734 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.55 | 33.0 | 3.37e-01 | 72.3% | 61.3% |
| 4145892 | 3949.1.1.2 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › DUF3603 | 0.54 | 42.0 | 4.16e-01 | 88.0% | 94.4% |
| 5013621 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.54 | 43.0 | 3.17e-01 | 90.4% | 84.2% |
| 3917153 | 101.1.1.148 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › EPL1 | 0.53 | 43.0 | 3.98e-01 | 86.7% | 97.1% |
| 4578321 | 3684.1.1.1 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 | 0.52 | 41.0 | 4.25e-01 | 85.5% | 97.5% |
| 3926720 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.52 | 37.0 | 4.03e-01 | 81.9% | 100.0% |
| 4647835 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.51 | 44.0 | 3.25e-01 | 97.6% | 80.0% |
| 4981747 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.51 | 32.0 | 3.53e-01 | 77.1% | 81.5% |
| 4024220 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 38.0 | 3.82e-01 | 85.5% | 80.0% |
| 3570625 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.51 | 44.0 | 4.27e-01 | 91.6% | 88.9% |