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MT732473.1__QQV91390.1__Leef1_26__00026
Bact-VirMT732473.1__QQV91390.1__Leef1_26__00026
Identity
- Accession:
- MT732473 ↗
- Kingdom:
- phage
Quality
68.0
mean pLDDT
Taxonomy
TaxID: 2745684
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-58
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svmA02 | 1.20.1050.70 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Large T antigen, SV40, domain 3 | 0.65 | 50.0 | 3.95e-01 | 85.5% | 81.4% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.64 | 49.0 | 3.67e-01 | 85.5% | 63.6% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 46.0 | 3.71e-01 | 83.6% | 41.2% |
| 2akoA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.60 | 49.0 | 3.35e-01 | 100.0% | 66.8% |
| 1usgA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 40.0 | 2.96e-01 | 72.7% | 27.8% |
| 4ljsA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 38.0 | 2.78e-01 | 81.8% | 24.1% |
| 1c41A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.54 | 38.0 | 2.84e-01 | 80.0% | 41.2% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 2.99e-01 | 80.0% | 49.3% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.53 | 35.0 | 2.90e-01 | 89.1% | 36.4% |
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 2.87e-01 | 94.5% | 36.1% |
| 7mjzA01 | 3.40.50.12160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylthiotransferase, N-terminal domain | 0.52 | 38.0 | 3.03e-01 | 81.8% | 57.4% |
| 5dteA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 39.0 | 3.01e-01 | 92.7% | 38.6% |
| 6u4bA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 40.0 | 2.56e-01 | 87.3% | 33.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3387479 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.72 | 45.0 | 3.48e-01 | 74.5% | 30.4% |
| 3507462 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.67 | 47.0 | 3.85e-01 | 74.5% | 72.0% |
| 4048659 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.64 | 53.0 | 3.56e-01 | 96.4% | 45.4% |
| 3600298 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 46.0 | 2.92e-01 | 78.2% | 24.3% |
| 3218064 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.61 | 46.0 | 3.67e-01 | 81.8% | 59.1% |
| 4108859 | 2003.1.2.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 | 0.59 | 45.0 | 3.52e-01 | 85.5% | 44.6% |
| 3602811 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.55 | 47.0 | 3.86e-01 | 100.0% | 83.6% |
| 4973872 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.53 | 39.0 | 3.06e-01 | 81.8% | 37.0% |
| 4947506 | 2004.1.1.233 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 | 0.53 | 40.0 | 2.80e-01 | 89.1% | 51.4% |
| 5005233 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.53 | 39.0 | 2.44e-01 | 81.8% | 19.7% |
| 4984406 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.52 | 40.0 | 3.21e-01 | 90.9% | 44.0% |
| 4642818 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.51 | 42.0 | 2.73e-01 | 100.0% | 48.4% |