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MT732473.1__QQV91404.1__Leef1_39__00039
Bact-VirMT732473.1__QQV91404.1__Leef1_39__00039
Identity
- Accession:
- MT732473 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
TaxID: 2745684
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-87
Domain cluster:
representative
D2
high
residues 94-156
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.76 | 58.0 | 5.29e-01 | 88.9% | 62.2% |
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.74 | 44.0 | 3.35e-01 | 93.7% | 27.3% |
| 3fdqA01 | 1.20.120.1030 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain | 0.74 | 60.0 | 4.82e-01 | 100.0% | 45.9% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.74 | 63.0 | 4.49e-01 | 95.2% | 40.3% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 54.0 | 4.98e-01 | 95.2% | 65.1% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 5.07e-01 | 92.1% | 77.3% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.67 | 56.0 | 4.47e-01 | 100.0% | 48.2% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.66 | 54.0 | 4.22e-01 | 98.4% | 41.9% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 49.0 | 4.86e-01 | 93.7% | 76.8% |
| 2j16A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.65 | 47.0 | 3.68e-01 | 85.7% | 36.1% |
| 4d3pA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.65 | 45.0 | 3.48e-01 | 84.1% | 32.0% |
| 3dpjF00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 54.0 | 3.96e-01 | 100.0% | 66.5% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 45.0 | 4.68e-01 | 96.8% | 78.3% |
| 2nt2A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 45.0 | 3.48e-01 | 84.1% | 33.8% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 48.0 | 4.66e-01 | 85.7% | 95.8% |
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 44.0 | 3.59e-01 | 85.7% | 38.7% |
| 2lxlA00 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.61 | 44.0 | 3.29e-01 | 76.2% | 56.4% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 53.0 | 4.98e-01 | 100.0% | 96.1% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 38.0 | 3.63e-01 | 73.0% | 54.1% |
| 3m3mA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 45.0 | 3.67e-01 | 100.0% | 43.1% |
| 4behA01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 45.0 | 4.54e-01 | 92.1% | 82.8% |
| 3rgoA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 48.0 | 3.67e-01 | 93.7% | 48.4% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.58 | 39.0 | 3.72e-01 | 90.5% | 59.5% |
| 2iexA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.58 | 34.0 | 3.68e-01 | 96.8% | 70.6% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 41.0 | 3.36e-01 | 85.7% | 39.7% |
| 2i6jA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 45.0 | 3.52e-01 | 100.0% | 78.9% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 47.0 | 3.97e-01 | 96.8% | 89.9% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 47.0 | 4.14e-01 | 100.0% | 94.6% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.52 | 45.0 | 4.08e-01 | 98.4% | 84.7% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.51 | 38.0 | 3.77e-01 | 88.9% | 77.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934293 | 4993.1.1.0 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit | 0.83 | 75.0 | 6.85e-01 | 100.0% | 77.5% |
| 3999174 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 66.0 | 6.62e-01 | 98.4% | 95.4% |
| 147067 | 3276.1.1.1 ↗ | alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › MogR_DNAbind | 0.74 | 60.0 | 6.03e-01 | 100.0% | 87.5% |
| 3696367 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 62.0 | 5.93e-01 | 100.0% | 89.3% |
| 3261605 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.72 | 59.0 | 5.49e-01 | 93.7% | 78.8% |
| 5027755 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 57.0 | 5.34e-01 | 90.5% | 70.0% |
| 3345767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.70 | 58.0 | 4.70e-01 | 100.0% | 48.0% |
| 4979742 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 52.0 | 4.84e-01 | 93.7% | 65.0% |
| 3255248 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.69 | 60.0 | 5.86e-01 | 100.0% | 94.3% |
| 3576763 | 101.1.1.332 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nucleolin_bd | 0.67 | 52.0 | 5.24e-01 | 88.9% | 84.6% |
| 5042704 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 55.0 | 5.45e-01 | 93.7% | 93.8% |
| 3970076 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 48.0 | 5.18e-01 | 84.1% | 98.0% |
| 3232086 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 57.0 | 5.06e-01 | 98.4% | 74.7% |
| 4957413 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.67 | 47.0 | 5.12e-01 | 82.5% | 96.0% |
| 3235 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.66 | 53.0 | 4.22e-01 | 98.4% | 42.5% |
| 3237792 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.61 | 45.0 | 4.36e-01 | 84.1% | 72.0% |
| 3302459 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.59 | 49.0 | 4.45e-01 | 92.1% | 77.6% |
| 3600801 | 1091.1.1.0 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 | 0.59 | 48.0 | 4.75e-01 | 96.8% | 87.1% |
| 3261593 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.59 | 48.0 | 3.56e-01 | 90.5% | 47.3% |
| 3712603 | 1091.1.1.1 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s | 0.59 | 48.0 | 4.74e-01 | 96.8% | 87.1% |
| 3285349 | 191.1.1.44 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_43 | 0.58 | 49.0 | 3.91e-01 | 100.0% | 85.7% |
| 4993673 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.54 | 39.0 | 2.91e-01 | 84.1% | 27.2% |
| 4949186 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.54 | 46.0 | 2.90e-01 | 100.0% | 18.5% |
| 4995916 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.54 | 44.0 | 3.99e-01 | 98.4% | 72.6% |
| 3271288 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 39.0 | 3.06e-01 | 84.1% | 32.5% |
| 3704795 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.53 | 47.0 | 3.94e-01 | 98.4% | 60.9% |
| 3096672 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.53 | 48.0 | 3.54e-01 | 100.0% | 58.6% |
| 3628706 | 109.4.1.587 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mon2_C | 0.53 | 46.0 | 2.80e-01 | 100.0% | 29.7% |
| 3353941 | 1134.1.1.7 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 | 0.50 | 39.0 | 3.92e-01 | 88.9% | 81.5% |
| 3596336 | 109.4.1.934 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ATR | 0.50 | 44.0 | 2.98e-01 | 100.0% | 25.8% |