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MT732474.1__QQV91482.1__Gundel1_49__00049
Bact-VirMT732474.1__QQV91482.1__Gundel1_49__00049
Identity
- Accession:
- MT732474 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pachyviridae›
Gundelvirus›
Tenacibaculum_phage_Gundel_1
TaxID: 2745672
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-62
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ee8A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.66 | 53.0 | 4.18e-01 | 89.3% | 85.8% |
| 1k82B01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.66 | 51.0 | 3.96e-01 | 83.9% | 47.2% |
| 1nnjA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.66 | 49.0 | 3.81e-01 | 82.1% | 46.2% |
| 3twlA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.65 | 49.0 | 3.83e-01 | 83.9% | 49.6% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.62 | 48.0 | 4.42e-01 | 100.0% | 64.0% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 54.0 | 4.56e-01 | 100.0% | 62.4% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 49.0 | 4.06e-01 | 100.0% | 52.0% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 49.0 | 3.82e-01 | 100.0% | 49.2% |
| 1k3xA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.55 | 40.0 | 3.28e-01 | 83.9% | 42.1% |
| 3s24A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 3.27e-01 | 73.2% | 70.2% |
| 1mbmA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 39.0 | 3.66e-01 | 96.4% | 61.1% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.54 | 45.0 | 3.70e-01 | 100.0% | 89.6% |
| 3qo6A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 36.0 | 3.05e-01 | 71.4% | 97.1% |
| 2f9aA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 38.0 | 2.32e-01 | 80.4% | 82.9% |
| 1nj8A03 | 3.30.110.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS | 0.52 | 34.0 | 3.40e-01 | 91.1% | 63.9% |
| 1auvA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.50 | 33.0 | 3.25e-01 | 76.8% | 61.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035481 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.71 | 51.0 | 3.84e-01 | 76.8% | 77.8% |
| 4291331 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.67 | 54.0 | 4.07e-01 | 89.3% | 85.2% |
| 4033403 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.67 | 53.0 | 3.94e-01 | 89.3% | 50.7% |
| 3593615 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.67 | 54.0 | 3.91e-01 | 89.3% | 76.8% |
| 4976841 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.67 | 50.0 | 4.05e-01 | 82.1% | 46.4% |
| 5029671 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.66 | 53.0 | 3.82e-01 | 87.5% | 70.0% |
| 4071792 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.65 | 52.0 | 3.99e-01 | 89.3% | 85.2% |
| 4457982 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.65 | 49.0 | 3.86e-01 | 85.7% | 48.5% |
| 5024498 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.64 | 52.0 | 3.95e-01 | 89.3% | 80.7% |
| 4229762 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.64 | 52.0 | 3.84e-01 | 91.1% | 47.1% |
| 5054125 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.64 | 51.0 | 3.79e-01 | 89.3% | 63.3% |
| 4947612 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 50.0 | 3.75e-01 | 85.7% | 42.9% |
| 3959450 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.61 | 49.0 | 3.82e-01 | 87.5% | 47.5% |
| 3885183 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.61 | 46.0 | 3.59e-01 | 82.1% | 45.4% |
| 5074810 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.61 | 48.0 | 3.71e-01 | 89.3% | 85.2% |
| 5039120 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 4.63e-01 | 78.6% | 97.8% |
| 3861269 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.57 | 42.0 | 3.47e-01 | 85.7% | 45.0% |
| 4613966 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 43.0 | 4.48e-01 | 94.6% | 96.0% |
| 3994523 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 40.0 | 3.79e-01 | 100.0% | 61.4% |
| 4295479 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 42.0 | 4.34e-01 | 89.3% | 100.0% |
| 3608468 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.54 | 41.0 | 3.87e-01 | 89.3% | 96.0% |
| 4275135 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 41.0 | 3.05e-01 | 100.0% | 69.4% |
| 3168192 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 37.0 | 3.18e-01 | 85.7% | 76.2% |