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MT732474.1__QQV91519.1__Gundel1_82__00082

Bact-Vir

MT732474.1__QQV91519.1__Gundel1_82__00082

Identity

Accession:
MT732474 ↗
Kingdom:
phage

Quality

74.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-139
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.72 66.0 4.99e-01 100.0% 66.0%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.72 65.0 4.92e-01 100.0% 62.7%
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.72 51.0 5.32e-01 95.7% 82.5%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.71 65.0 4.98e-01 100.0% 65.1%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.71 65.0 4.88e-01 100.0% 65.8%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.71 64.0 4.84e-01 100.0% 66.3%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 64.0 4.88e-01 100.0% 64.5%
2r0xA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 64.0 4.86e-01 100.0% 66.0%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 64.0 4.92e-01 100.0% 65.1%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 63.0 4.81e-01 100.0% 66.7%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 64.0 4.61e-01 100.0% 57.0%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 63.0 4.72e-01 100.0% 62.7%
2qckA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 62.0 4.83e-01 100.0% 66.9%
1ejeA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 63.0 4.53e-01 100.0% 55.7%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 62.0 4.84e-01 100.0% 62.4%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 62.0 4.58e-01 100.0% 56.4%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 62.0 4.58e-01 100.0% 57.9%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 63.0 4.76e-01 100.0% 64.7%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 62.0 4.71e-01 100.0% 65.8%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 61.0 4.63e-01 100.0% 64.0%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 59.0 4.81e-01 100.0% 71.4%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.66 58.0 4.89e-01 100.0% 62.3%
2f1lA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.66 51.0 4.69e-01 94.3% 65.2%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 47.0 3.98e-01 98.6% 45.8%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 47.0 4.39e-01 98.6% 61.8%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 56.0 4.76e-01 100.0% 76.5%
3cr8A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.64 57.0 4.51e-01 100.0% 68.1%
3mfxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 52.0 4.44e-01 91.4% 89.5%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.63 56.0 4.99e-01 100.0% 74.0%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 53.0 4.98e-01 98.6% 76.1%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 53.0 5.08e-01 97.1% 85.2%
4redB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 50.0 4.70e-01 92.9% 77.4%
1k3xA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.58 42.0 3.52e-01 77.1% 47.6%
1feuA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.58 49.0 4.57e-01 95.7% 92.3%
5dm6S01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.58 49.0 4.64e-01 95.7% 97.7%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 50.0 3.44e-01 100.0% 61.9%
3ihmA02 3.30.9.40 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.56 41.0 3.40e-01 82.9% 54.2%
2y4iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 4.24e-01 98.6% 71.4%
3w1eA01 3.30.1660.40 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain 0.55 47.0 4.32e-01 94.3% 93.3%
2veaA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 44.0 3.76e-01 95.7% 70.0%
6j7cA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 41.0 3.29e-01 90.0% 100.0%
2aznA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.52 46.0 3.23e-01 97.1% 96.8%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.52 43.0 3.77e-01 94.3% 73.4%
3i4hX02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 43.0 3.83e-01 94.3% 67.3%
3bjnA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 43.0 3.44e-01 100.0% 65.4%
4lb0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 40.0 3.19e-01 90.0% 100.0%
6r77A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 40.0 3.17e-01 90.0% 100.0%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.51 44.0 3.47e-01 97.1% 45.8%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 45.0 4.02e-01 100.0% 99.0%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 36.0 3.20e-01 78.6% 99.1%
3ct9A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 40.0 3.63e-01 94.3% 78.5%
3jvvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 44.0 3.95e-01 100.0% 98.0%
1uxbA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.50 42.0 3.23e-01 100.0% 85.9%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946849 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 51.0 5.83e-01 88.6% 100.0%
4399539 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.73 66.0 4.74e-01 100.0% 67.2%
5040595 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.73 66.0 5.00e-01 100.0% 66.3%
4132799 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.72 66.0 4.98e-01 100.0% 64.4%
4512371 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.72 65.0 4.94e-01 100.0% 63.7%
1064500 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.72 65.0 4.94e-01 100.0% 64.4%
4505054 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.72 65.0 4.88e-01 100.0% 62.4%
3744150 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 65.0 4.74e-01 100.0% 58.7%
3329019 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 45.0 5.07e-01 87.1% 88.0%
4600482 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 65.0 4.84e-01 100.0% 60.0%
72 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 65.0 4.91e-01 100.0% 66.0%
4452870 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.71 57.0 5.25e-01 95.7% 67.8%
5010878 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 65.0 5.42e-01 100.0% 60.9%
3786062 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 64.0 4.75e-01 100.0% 62.8%
3964364 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 64.0 4.82e-01 100.0% 63.6%
1844144 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 64.0 4.80e-01 100.0% 64.2%
1217791 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.71 64.0 4.74e-01 100.0% 57.9%
4930482 1.1.5.17 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.70 64.0 5.21e-01 100.0% 68.0%
4203095 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 63.0 4.02e-01 100.0% 34.3%
300370 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 64.0 4.86e-01 100.0% 64.1%
4322066 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.73e-01 100.0% 59.4%
4934269 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 64.0 4.78e-01 100.0% 64.8%
3284360 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.80e-01 100.0% 65.6%
4986653 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 64.0 4.65e-01 100.0% 59.8%
4551218 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 64.0 4.76e-01 100.0% 60.0%
5033350 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.65e-01 100.0% 60.1%
3026889 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.64e-01 100.0% 58.4%
5055743 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.97e-01 100.0% 74.3%
4507179 1.1.9.48 beta barrels › cradle loop barrel › RIFT-related › PUA domain › AAA 0.70 62.0 3.63e-01 100.0% 20.3%
4930864 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.62e-01 100.0% 60.0%
4974855 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 63.0 4.72e-01 100.0% 64.8%
3987737 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.70 59.0 4.63e-01 91.4% 67.1%
164880 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.75e-01 100.0% 63.5%
3959626 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 63.0 4.72e-01 100.0% 61.8%
4882518 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 63.0 4.81e-01 100.0% 66.5%
3279401 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 63.0 4.71e-01 100.0% 61.2%
5059425 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.58e-01 100.0% 60.0%
70 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.58e-01 100.0% 57.9%
4489896 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 63.0 4.59e-01 100.0% 57.8%
5051353 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.58e-01 100.0% 60.0%
1560729 1.1.5.35 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.69 60.0 4.80e-01 100.0% 67.4%
5066329 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.62e-01 100.0% 62.9%
4318524 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.68e-01 100.0% 61.2%
4469941 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.67e-01 100.0% 63.0%
4348615 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 62.0 4.52e-01 100.0% 55.1%
3787546 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.69 61.0 3.90e-01 100.0% 40.3%
4954766 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.69 61.0 4.61e-01 100.0% 62.4%
4978345 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.60e-01 100.0% 62.9%
4926809 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.67e-01 100.0% 65.6%
4990516 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 62.0 4.53e-01 100.0% 60.0%
5043252 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.55e-01 100.0% 61.1%
165640 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.57e-01 100.0% 61.0%
4948135 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.43e-01 100.0% 57.4%
4496885 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.43e-01 100.0% 56.8%
4978636 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.45e-01 100.0% 58.2%
4981490 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 61.0 4.53e-01 100.0% 61.7%
4469190 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.67 60.0 4.08e-01 100.0% 68.8%
5017812 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.67 60.0 4.36e-01 100.0% 56.8%
4026988 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.67 60.0 4.04e-01 100.0% 34.6%
5002629 1.1.5.17 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.66 59.0 4.69e-01 100.0% 68.6%
3587815 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 60.0 5.23e-01 100.0% 67.6%
4951126 1.1.5.17 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.65 57.0 4.24e-01 100.0% 53.3%
1108188 1.1.5.17 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.64 56.0 4.68e-01 100.0% 82.5%
3868227 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 52.0 4.75e-01 98.6% 67.4%
4264762 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.63 55.0 3.66e-01 100.0% 31.0%
4950373 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.62 49.0 3.89e-01 91.4% 42.9%
4662737 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.62 47.0 4.35e-01 94.3% 64.4%
4051617 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.59 53.0 4.35e-01 100.0% 60.0%
3212681 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.07e-01 92.9% 66.7%
3516562 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.57 51.0 4.07e-01 100.0% 53.6%
3830572 5058.1.1.84 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Msl2-3_C 0.55 46.0 4.04e-01 94.3% 68.6%
5038341 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.54 45.0 3.97e-01 94.3% 66.7%
4009877 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.54 39.0 3.50e-01 90.0% 53.3%
3602033 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 41.0 2.46e-01 82.9% 32.0%
3711918 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 35.0 2.94e-01 71.4% 80.0%
3340180 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.51 41.0 3.77e-01 94.3% 70.0%
3359431 886.1.1.1 a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › SOUL 0.51 42.0 3.21e-01 94.3% 38.9%
4601283 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.51 43.0 3.71e-01 94.3% 64.5%
3912756 886.1.1.1 a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › SOUL 0.50 41.0 3.06e-01 92.9% 36.8%
4980649 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.50 41.0 3.64e-01 92.9% 62.0%
3602459 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.50 40.0 3.54e-01 94.3% 69.6%
D2 high residues 266-396
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.71 42.0 5.32e-01 99.2% 100.0%
2f0cA02 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.70 51.0 5.67e-01 100.0% 96.2%
1m53A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.69 41.0 5.16e-01 99.2% 100.0%
5zceA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.69 41.0 5.13e-01 96.2% 100.0%
2yfoA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 48.0 5.46e-01 99.2% 99.0%
1wzlA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 43.0 5.11e-01 97.7% 100.0%
2iumA00 2.60.90.30 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Fiber protein 1, C-terminal domain 0.66 61.0 5.17e-01 100.0% 97.2%
2fsdA00 2.60.40.2460 Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain 0.66 52.0 5.59e-01 100.0% 99.1%
2ze0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 40.0 4.92e-01 96.9% 100.0%
5e1qA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 46.0 5.31e-01 97.7% 100.0%
1j0hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 41.0 4.89e-01 98.5% 100.0%
3wy2A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 37.0 4.61e-01 99.2% 100.0%
3zssA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 42.0 4.82e-01 96.2% 100.0%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.62 56.0 5.07e-01 100.0% 97.7%
1kacA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.61 56.0 4.97e-01 100.0% 96.2%
6g47A00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.61 55.0 5.05e-01 100.0% 97.7%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.61 55.0 4.87e-01 100.0% 97.9%
5zbeA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 42.0 4.61e-01 99.2% 87.9%
1uxbA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.60 54.0 4.87e-01 100.0% 98.4%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 42.0 4.50e-01 93.9% 84.7%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 48.0 4.57e-01 87.0% 93.3%
2woyA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 4.23e-01 83.2% 81.0%
4ofqA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 45.0 4.25e-01 83.2% 80.6%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.56 46.0 3.94e-01 87.8% 95.8%
4mboA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.50e-01 91.6% 78.8%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 51.0 4.80e-01 100.0% 99.4%
1ygaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 49.0 3.71e-01 100.0% 94.9%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.55 40.0 2.79e-01 74.8% 32.4%
3nreA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 49.0 3.82e-01 100.0% 94.8%
1g1kA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.93e-01 87.8% 69.9%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 39.0 2.94e-01 74.8% 98.8%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.54 45.0 4.24e-01 87.8% 91.6%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.54 45.0 4.36e-01 88.5% 91.2%
3k25A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 48.0 3.78e-01 100.0% 92.4%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 48.0 3.67e-01 98.5% 89.7%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.53 44.0 4.50e-01 97.7% 90.8%
3q1nA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 48.0 3.69e-01 100.0% 97.3%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.53 44.0 3.41e-01 90.1% 80.4%
3vsmA02 2.70.98.100 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 0.52 45.0 4.00e-01 96.2% 89.1%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.68e-01 91.6% 79.0%
3actA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 47.0 3.66e-01 100.0% 84.8%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 46.0 3.57e-01 100.0% 78.1%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.51 46.0 3.68e-01 100.0% 70.8%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 41.0 3.95e-01 87.8% 93.5%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.73e-01 88.5% 64.1%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2491361 5092.1.1.0 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.84 79.0 7.90e-01 100.0% 98.5%
3164980 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.79 73.0 7.40e-01 99.2% 99.2%
5051788 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.70 52.0 5.76e-01 99.2% 96.2%
961561 5092.1.1.4 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP 0.70 51.0 5.67e-01 100.0% 97.1%
1970 12.1.1.24 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C 0.67 43.0 5.11e-01 97.7% 100.0%
134962 12.1.1.75 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SusG_C 0.67 41.0 5.06e-01 100.0% 100.0%
2834097 5092.1.1.5 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › AdHead_fibreRBD 0.65 60.0 5.05e-01 100.0% 95.8%
3989856 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 51.0 5.06e-01 100.0% 82.1%
3587590 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 40.0 4.36e-01 87.0% 80.0%
140191 5092.1.1.1 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Adeno_knob 0.62 56.0 5.07e-01 100.0% 97.7%
3401979 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.61 47.0 4.00e-01 92.4% 49.1%
3099010 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 41.0 4.34e-01 92.4% 79.0%
3716614 11.1.1.67 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.57 38.0 3.90e-01 97.7% 70.4%
5047980 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.56 50.0 3.88e-01 100.0% 80.3%
3984821 5084.2.1.1 beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › Omptin 0.56 47.0 3.61e-01 90.1% 91.5%
4099548 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.56 46.0 4.45e-01 88.5% 92.7%
1487334 5092.1.1.7 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fibre_HD 0.56 43.0 4.49e-01 100.0% 92.2%
3588213 12.3.1.45 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2264_C 0.55 50.0 3.95e-01 100.0% 81.1%
4421608 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.55 45.0 3.70e-01 87.8% 96.2%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.54 44.0 3.74e-01 85.5% 61.9%
1412232 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.54 49.0 3.66e-01 100.0% 90.0%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.54 45.0 3.97e-01 88.5% 93.7%
4224449 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.54 45.0 4.10e-01 88.5% 93.1%
3589839 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.54 49.0 3.65e-01 100.0% 91.0%
3943954 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.53 48.0 3.81e-01 100.0% 94.9%
5025201 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.53 48.0 3.79e-01 100.0% 93.2%
5084039 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.53 47.0 3.65e-01 100.0% 93.1%
4932771 11.1.1.1128 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27408 0.53 46.0 4.47e-01 100.0% 85.3%
3165475 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.52 43.0 4.03e-01 87.8% 90.5%
224808 11.1.1.194 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM9_2 0.52 43.0 3.68e-01 91.6% 79.0%
3838722 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.51 43.0 3.26e-01 89.3% 83.4%
5028833 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 44.0 4.14e-01 100.0% 76.9%
3182866 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 45.0 4.29e-01 100.0% 92.8%
3252937 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.50 37.0 4.02e-01 77.1% 97.1%