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MT740307.1__QNR53801.1__phiK7A1_011c__00011

Bact-Vir

MT740307.1__QNR53801.1__phiK7A1_011c__00011

Identity

Accession:
MT740307 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-58
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.91 80.0 5.10e-01 100.0% 22.0%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 80.0 5.31e-01 100.0% 27.9%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.89 76.0 6.24e-01 98.2% 53.7%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.85 77.0 5.18e-01 100.0% 47.7%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.84 68.0 6.07e-01 92.7% 63.2%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.82 74.0 5.91e-01 100.0% 52.4%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.81 73.0 5.52e-01 100.0% 49.6%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 58.0 4.65e-01 80.0% 41.7%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.79 60.0 4.37e-01 83.6% 31.9%
4gltA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.78 63.0 4.98e-01 94.5% 43.0%
1e1hB01 1.20.58.540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 67.0 5.31e-01 96.4% 49.5%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.76 68.0 5.91e-01 96.4% 66.3%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.76 66.0 4.64e-01 100.0% 75.0%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.76 64.0 5.68e-01 96.4% 73.2%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.76 67.0 5.46e-01 100.0% 53.9%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.76 67.0 5.60e-01 100.0% 84.2%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 62.0 5.88e-01 100.0% 76.5%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.75 49.0 5.35e-01 70.9% 82.2%
3ns4A00 1.10.357.110 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus 0.74 63.0 4.23e-01 94.5% 41.5%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 65.0 6.02e-01 100.0% 76.4%
1qgrA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.74 57.0 3.11e-01 85.5% 5.4%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.74 61.0 5.72e-01 98.2% 75.8%
3geeA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.73 59.0 4.15e-01 98.2% 29.2%
3hh0A02 6.10.250.360 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.73 63.0 6.06e-01 92.7% 90.3%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 61.0 5.62e-01 100.0% 73.3%
2wzkA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.72 60.0 4.57e-01 92.7% 63.0%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.72 59.0 5.40e-01 98.2% 71.4%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 59.0 4.93e-01 96.4% 53.1%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.71 49.0 5.18e-01 74.5% 85.4%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.70 62.0 5.98e-01 96.4% 88.5%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 59.0 5.40e-01 98.2% 73.3%
4bzaA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.70 39.0 3.64e-01 85.5% 44.1%
4kzsA02 6.10.140.1870 Special › Helix non-globular › Helix Hairpins › 0.70 53.0 4.94e-01 83.6% 65.7%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 56.0 5.23e-01 92.7% 71.8%
4wjg400 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.69 63.0 3.93e-01 98.2% 42.9%
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.68 51.0 4.99e-01 96.4% 74.2%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.66 45.0 4.25e-01 90.9% 57.4%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 55.0 5.03e-01 96.4% 71.2%
1chuA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.63 44.0 3.93e-01 78.2% 52.3%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.60 46.0 4.54e-01 83.6% 79.3%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.60 46.0 4.77e-01 83.6% 88.5%
3mhsB00 1.10.246.140 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 0.55 41.0 3.52e-01 81.8% 78.0%
4dhxB00 1.10.246.140 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 0.52 40.0 3.43e-01 83.6% 76.9%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3297770 622.4.1.26 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA 0.92 85.0 7.13e-01 98.2% 92.9%
3595108 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.91 62.0 5.13e-01 70.9% 44.4%
3453933 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.90 78.0 6.11e-01 100.0% 47.3%
3664164 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.87 78.0 5.84e-01 100.0% 42.3%
4929436 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.87 80.0 6.93e-01 100.0% 68.8%
5002748 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.86 79.0 7.05e-01 100.0% 73.3%
5041271 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 77.0 6.93e-01 100.0% 73.3%
3628093 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.85 78.0 6.18e-01 100.0% 59.0%
3412574 3291.1.1.82 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › ING 0.84 76.0 5.67e-01 100.0% 42.3%
3166862 192.15.1.2 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r 0.84 58.0 3.90e-01 72.7% 23.3%
4521514 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.84 75.0 6.75e-01 100.0% 73.3%
4594578 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.83 75.0 6.18e-01 100.0% 56.8%
3783873 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.83 72.0 5.29e-01 100.0% 38.5%
3491815 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.83 69.0 5.74e-01 90.9% 53.2%
5051879 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.83 72.0 6.53e-01 98.2% 72.0%
3916497 632.8.1.17 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Rab_eff_C 0.82 74.0 5.61e-01 100.0% 44.0%
3600792 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.82 70.0 4.13e-01 100.0% 12.8%
4877501 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.82 73.0 5.16e-01 100.0% 36.2%
3786155 4015.1.1.1 alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 0.82 74.0 4.80e-01 98.2% 42.3%
4981299 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.81 69.0 5.65e-01 100.0% 52.0%
4463756 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.81 68.0 6.31e-01 100.0% 74.3%
3372032 5028.1.1.0 extended segments › Sec-beta subunit › Sec-beta subunit › Sec-beta subunit 0.81 60.0 6.00e-01 78.2% 80.0%
3272165 4207.1.1.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.80 61.0 4.74e-01 87.3% 40.0%
3852378 4177.1.1.61 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PLC-beta_C 0.80 73.0 4.62e-01 100.0% 45.4%
3240501 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.80 71.0 5.24e-01 100.0% 69.3%
5050356 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.80 68.0 6.28e-01 94.5% 74.3%
5049840 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.80 70.0 6.37e-01 100.0% 73.3%
3447988 603.1.1.102 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3537 0.80 67.0 4.55e-01 100.0% 26.7%
4684 192.15.1.2 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r 0.79 67.0 6.37e-01 98.2% 80.0%
5021415 3579.1.1.33 extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › PsiE 0.79 71.0 5.40e-01 100.0% 47.2%
4324592 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.79 72.0 5.82e-01 100.0% 56.0%
3594486 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.79 69.0 5.36e-01 100.0% 45.8%
5040175 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.79 69.0 5.46e-01 100.0% 50.4%
3622196 604.1.1.63 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 0.78 68.0 5.26e-01 98.2% 60.8%
3491418 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.78 69.0 6.24e-01 100.0% 73.3%
3487862 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.78 69.0 4.47e-01 100.0% 22.9%
1877692 6026.1.1.1 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 0.78 51.0 5.43e-01 87.3% 77.1%
5044800 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.78 68.0 6.07e-01 100.0% 73.8%
2323907 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.78 67.0 4.45e-01 100.0% 24.2%
3944006 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.77 68.0 5.20e-01 100.0% 55.2%
5040661 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.77 67.0 6.23e-01 98.2% 78.6%
5050359 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.77 63.0 5.86e-01 90.9% 71.4%
3849547 4992.1.1.25 extended segments › RelB-like › RelB-like › RelB-like › SHCBP_N 0.77 65.0 5.43e-01 94.5% 54.7%
4946656 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.77 69.0 5.31e-01 100.0% 60.0%
4010416 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 67.0 5.17e-01 100.0% 55.2%
3857880 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 66.0 4.88e-01 98.2% 38.6%
4964984 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.76 69.0 5.54e-01 98.2% 55.0%
4030666 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.76 63.0 5.40e-01 98.2% 62.1%
4940986 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.75 65.0 5.32e-01 92.7% 68.4%
5020922 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.75 66.0 5.37e-01 100.0% 56.2%
4569385 377.1.1.2 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 0.75 56.0 4.62e-01 81.8% 44.9%
3781013 3291.1.1.170 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › WWC1 0.75 64.0 4.80e-01 96.4% 41.5%
865208 3560.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 0.74 65.0 4.60e-01 100.0% 31.6%
3598215 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.74 65.0 4.58e-01 98.2% 35.3%
3600712 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.73 66.0 5.68e-01 100.0% 64.7%
3214360 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.73 59.0 4.99e-01 98.2% 55.3%
3932320 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.71 60.0 4.45e-01 100.0% 37.1%
3462105 192.8.1.277 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DOG1 0.71 55.0 4.87e-01 96.4% 57.6%
3215342 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.71 60.0 5.11e-01 100.0% 62.1%
4025757 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.70 59.0 4.01e-01 100.0% 25.0%
4116779 603.1.1.174 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HisKA 0.70 59.0 5.41e-01 100.0% 80.0%
3264065 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.69 58.0 5.23e-01 100.0% 75.0%
5013534 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 55.0 4.08e-01 100.0% 34.2%
3664076 148.1.1.1 alpha arrays › Histone-like › Histone-related › Histone › Histone 0.66 59.0 4.69e-01 100.0% 54.5%