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MT740307.1__QNR53809.1__phiK7A1_019c__00019
Bact-VirMT740307.1__QNR53809.1__phiK7A1_019c__00019
Identity
- Accession:
- MT740307 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Torinovirus›
Pseudomonas_phage_phiK7A1
TaxID: 2759194
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.77 | 55.0 | 4.81e-01 | 100.0% | 50.6% |
| 6xgzE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 62.0 | 4.01e-01 | 100.0% | 38.3% |
| 1wj7A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.71 | 52.0 | 5.02e-01 | 100.0% | 70.0% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.71 | 63.0 | 5.36e-01 | 100.0% | 69.0% |
| 1tj7A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.71 | 62.0 | 5.70e-01 | 100.0% | 74.6% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.70 | 59.0 | 5.20e-01 | 100.0% | 84.5% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 59.0 | 4.21e-01 | 94.4% | 86.5% |
| 2lklA01 | 1.10.1900.40 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › Acidic terminal segments, variant surface antigen of PfEMP1 | 0.69 | 57.0 | 5.28e-01 | 98.1% | 93.1% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.69 | 60.0 | 5.49e-01 | 100.0% | 73.6% |
| 1xaiA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.68 | 59.0 | 4.04e-01 | 96.3% | 61.3% |
| 3gagA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.66 | 48.0 | 3.28e-01 | 79.6% | 22.8% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.89e-01 | 81.5% | 81.8% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 5.07e-01 | 87.0% | 82.8% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.65 | 52.0 | 4.62e-01 | 100.0% | 74.7% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 55.0 | 4.32e-01 | 90.7% | 52.0% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 54.0 | 4.82e-01 | 100.0% | 75.3% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.63 | 55.0 | 4.85e-01 | 100.0% | 67.5% |
| 5j6bD01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.63 | 56.0 | 3.50e-01 | 100.0% | 53.7% |
| 1o8uC00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.63 | 46.0 | 3.03e-01 | 81.5% | 80.6% |
| 1t90A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.62 | 55.0 | 3.47e-01 | 100.0% | 53.6% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 51.0 | 4.39e-01 | 100.0% | 61.9% |
| 3pqaB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.61 | 54.0 | 3.45e-01 | 100.0% | 56.2% |
| 4i3vA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.61 | 53.0 | 3.41e-01 | 100.0% | 57.6% |
| 1uxtA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.61 | 54.0 | 3.43e-01 | 100.0% | 56.4% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 50.0 | 4.41e-01 | 100.0% | 85.2% |
| 7w5lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.60 | 52.0 | 3.37e-01 | 100.0% | 59.4% |
| 3ju8A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.59 | 52.0 | 3.28e-01 | 100.0% | 50.9% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 49.0 | 4.39e-01 | 100.0% | 79.5% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.59 | 51.0 | 3.27e-01 | 100.0% | 55.6% |
| 1z6mA02 | 1.10.1200.90 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › DsbA-like domain | 0.59 | 46.0 | 4.55e-01 | 94.4% | 83.6% |
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.59 | 50.0 | 5.06e-01 | 98.1% | 100.0% |
| 2j6lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 50.0 | 3.18e-01 | 100.0% | 51.3% |
| 3rh9A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 49.0 | 3.13e-01 | 100.0% | 52.2% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.56 | 49.0 | 4.53e-01 | 96.3% | 86.8% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.54 | 42.0 | 3.89e-01 | 87.0% | 66.7% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.53 | 43.0 | 3.81e-01 | 98.1% | 71.9% |
| 3vz3A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 43.0 | 2.84e-01 | 100.0% | 47.9% |
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.50 | 42.0 | 3.68e-01 | 100.0% | 72.7% |
| 3d8lA00 | 1.10.8.940 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 | 0.50 | 40.0 | 3.54e-01 | 98.1% | 70.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503552 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.88 | 61.0 | 4.38e-01 | 72.2% | 36.0% |
| 4974404 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.82 | 57.0 | 4.26e-01 | 72.2% | 55.8% |
| 3528955 | 103.4.1.6 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › EloA-BP1 | 0.81 | 64.0 | 6.19e-01 | 85.2% | 88.3% |
| 4941372 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.80 | 54.0 | 4.57e-01 | 70.4% | 71.8% |
| 4960441 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.79 | 68.0 | 4.45e-01 | 100.0% | 35.9% |
| 4040783 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.79 | 64.0 | 6.37e-01 | 96.3% | 87.3% |
| 3368905 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.78 | 69.0 | 5.95e-01 | 100.0% | 71.8% |
| 4025313 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.78 | 60.0 | 5.43e-01 | 85.2% | 62.9% |
| 3215052 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.77 | 59.0 | 5.02e-01 | 81.5% | 61.2% |
| 3594808 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.76 | 62.0 | 3.98e-01 | 87.0% | 86.8% |
| 4639278 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.75 | 65.0 | 5.86e-01 | 98.1% | 73.3% |
| 4388170 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.73 | 62.0 | 6.09e-01 | 98.1% | 88.3% |
| 2141738 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.73 | 62.0 | 5.19e-01 | 100.0% | 67.7% |
| 5067260 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.72 | 64.0 | 5.41e-01 | 100.0% | 67.8% |
| 4510528 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.72 | 66.0 | 5.50e-01 | 100.0% | 60.0% |
| 3923696 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.72 | 49.0 | 4.20e-01 | 72.2% | 46.7% |
| 5066162 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.72 | 61.0 | 5.07e-01 | 100.0% | 64.0% |
| 4934727 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.71 | 63.0 | 5.23e-01 | 100.0% | 72.6% |
| 5057411 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.71 | 62.0 | 5.47e-01 | 100.0% | 68.8% |
| 4997861 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.70 | 61.0 | 5.10e-01 | 100.0% | 64.2% |
| 4042981 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.70 | 60.0 | 5.18e-01 | 96.3% | 64.7% |
| 5022467 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.69 | 58.0 | 4.63e-01 | 88.9% | 49.0% |
| 3946182 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.68 | 58.0 | 4.96e-01 | 98.1% | 67.8% |
| 3750535 | 181.1.1.21 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PF30827 | 0.68 | 56.0 | 5.18e-01 | 100.0% | 89.3% |
| 3951854 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.66 | 52.0 | 5.06e-01 | 87.0% | 80.0% |
| 3289310 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.64 | 49.0 | 4.88e-01 | 83.3% | 87.3% |
| 3959245 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.64 | 48.0 | 4.20e-01 | 83.3% | 56.5% |
| 3799156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 58.0 | 5.16e-01 | 98.1% | 90.5% |
| 3231495 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.63 | 52.0 | 3.41e-01 | 92.6% | 25.8% |
| 3395248 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.62 | 53.0 | 4.25e-01 | 100.0% | 53.0% |
| 3689958 | 3589.1.1.1 ↗ | a+b complex topology › RNAi polymerase N-terminal domain › RNAi polymerase N-terminal domain › RNAi polymerase N-terminal domain › RdRP | 0.62 | 50.0 | 3.36e-01 | 100.0% | 21.6% |
| 3253152 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.61 | 51.0 | 4.34e-01 | 94.4% | 58.9% |
| 3629317 | 7516.1.1.82 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Chitin_synth_2 | 0.60 | 50.0 | 2.99e-01 | 92.6% | 15.7% |
| 4533356 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.60 | 45.0 | 4.08e-01 | 87.0% | 73.8% |
| 3385527 | 148.1.3.55 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C | 0.59 | 48.0 | 4.74e-01 | 100.0% | 100.0% |
| 3838410 | 148.1.3.55 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C | 0.58 | 47.0 | 4.58e-01 | 100.0% | 89.2% |
| 3279903 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.57 | 50.0 | 3.84e-01 | 100.0% | 55.2% |
| 3685640 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.57 | 46.0 | 4.04e-01 | 94.4% | 75.3% |
| None | — | 0.57 | 47.0 | 2.74e-01 | 100.0% | 26.7% | |
| 4531996 | 602.1.1.3 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_aromatic | 0.54 | 43.0 | 2.70e-01 | 92.6% | 64.1% |
| 3284946 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.53 | 42.0 | 2.94e-01 | 92.6% | 33.5% |
| 3580322 | 604.17.1.2 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › PF30475 | 0.52 | 35.0 | 3.25e-01 | 70.4% | 53.3% |