←Back to structures
MT740307.1__QNR53876.1__phiK7A1_088__00086
Bact-VirMT740307.1__QNR53876.1__phiK7A1_088__00086
Identity
- Accession:
- MT740307 ↗
- Kingdom:
- phage
Quality
78.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Torinovirus›
Pseudomonas_phage_phiK7A1
TaxID: 2759194
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 350-443
Domain cluster:
rep: MW960037.1__QWY83581.1__X__00027__D159-241
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.72 | 46.0 | 3.67e-01 | 79.8% | 34.1% |
| 1a57A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 44.0 | 4.14e-01 | 80.9% | 56.9% |
| 3stoA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.64 | 45.0 | 3.83e-01 | 72.3% | 76.0% |
| 3zhaQ02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.64 | 45.0 | 4.01e-01 | 73.4% | 74.8% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 47.0 | 4.17e-01 | 94.7% | 56.4% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 45.0 | 4.88e-01 | 76.6% | 94.7% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 39.0 | 4.09e-01 | 78.7% | 71.4% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 45.0 | 4.04e-01 | 92.6% | 56.5% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.60 | 52.0 | 5.07e-01 | 95.7% | 87.7% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 37.0 | 4.08e-01 | 84.0% | 81.7% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.58 | 37.0 | 3.36e-01 | 81.9% | 46.9% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 44.0 | 3.72e-01 | 79.8% | 54.6% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 48.0 | 3.41e-01 | 91.5% | 47.5% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 46.0 | 3.37e-01 | 87.2% | 40.8% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 41.0 | 3.80e-01 | 75.5% | 60.8% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.56 | 47.0 | 3.04e-01 | 91.5% | 31.6% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 46.0 | 4.39e-01 | 89.4% | 80.9% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 45.0 | 3.76e-01 | 86.2% | 68.5% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 46.0 | 3.16e-01 | 90.4% | 52.2% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 40.0 | 3.70e-01 | 75.5% | 60.0% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 43.0 | 4.25e-01 | 85.1% | 99.0% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 44.0 | 3.14e-01 | 91.5% | 43.0% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 38.0 | 2.81e-01 | 75.5% | 42.0% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.94e-01 | 94.7% | 66.4% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.53 | 40.0 | 3.26e-01 | 78.7% | 47.0% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 45.0 | 4.06e-01 | 96.8% | 79.5% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.35e-01 | 72.3% | 90.1% |
| 3c5mA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.82e-01 | 91.5% | 23.9% |
| 1ei5A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 40.0 | 2.74e-01 | 85.1% | 69.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.79 | 45.0 | 4.24e-01 | 74.5% | 48.2% |
| 4221174 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.79 | 67.0 | 6.73e-01 | 90.4% | 95.8% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.75 | 47.0 | 3.80e-01 | 73.4% | 34.3% |
| 4203746 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.74 | 47.0 | 3.73e-01 | 80.9% | 33.3% |
| 4879580 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.71 | 44.0 | 3.68e-01 | 75.5% | 37.9% |
| 2581425 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.71 | 39.0 | 4.97e-01 | 78.7% | 92.7% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.69 | 44.0 | 3.47e-01 | 80.9% | 32.8% |
| 3438388 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.69 | 44.0 | 3.87e-01 | 80.9% | 45.2% |
| 4390515 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.68 | 42.0 | 3.50e-01 | 72.3% | 36.9% |
| 4092565 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.68 | 43.0 | 3.49e-01 | 80.9% | 35.3% |
| 3928816 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 54.0 | 3.63e-01 | 89.4% | 38.9% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 40.0 | 4.63e-01 | 83.0% | 89.2% |
| 5003245 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.64 | 41.0 | 4.58e-01 | 70.2% | 85.7% |
| 5038973 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 53.0 | 3.55e-01 | 91.5% | 39.1% |
| 3630390 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.61 | 53.0 | 3.56e-01 | 95.7% | 48.3% |
| 3391913 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.61 | 47.0 | 4.38e-01 | 84.0% | 85.0% |
| 3596663 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.60 | 51.0 | 3.63e-01 | 91.5% | 93.1% |
| 3265841 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.60 | 41.0 | 4.10e-01 | 97.9% | 67.0% |
| 3402152 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 42.0 | 3.93e-01 | 87.2% | 60.0% |
| 3693440 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 46.0 | 3.73e-01 | 88.3% | 98.9% |
| 3802832 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 48.0 | 3.28e-01 | 91.5% | 30.2% |
| 3418470 | 5.1.3.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 | 0.57 | 46.0 | 3.18e-01 | 88.3% | 29.8% |
| 3944596 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.56 | 48.0 | 4.56e-01 | 94.7% | 81.7% |
| 3788776 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.56 | 46.0 | 3.20e-01 | 91.5% | 40.3% |
| 4014784 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.56 | 36.0 | 3.61e-01 | 70.2% | 63.3% |
| 5792 | 295.1.1.6 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 | 0.55 | 40.0 | 3.69e-01 | 75.5% | 59.5% |
| 3831470 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.55 | 45.0 | 3.27e-01 | 90.4% | 34.3% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 46.0 | 3.26e-01 | 92.6% | 41.6% |
| 3955452 | 5.1.2.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF4185 | 0.55 | 46.0 | 3.19e-01 | 92.6% | 49.3% |
| 4059006 | 9.9.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB | 0.54 | 41.0 | 3.71e-01 | 79.8% | 64.8% |
| 3556145 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.53 | 43.0 | 3.36e-01 | 90.4% | 54.4% |
D2
medium
residues 24-103
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.54 | 49.0 | 4.63e-01 | 97.5% | 98.9% |
| 1c0aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 46.0 | 3.11e-01 | 98.8% | 79.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3847690 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.52 | 36.0 | 2.83e-01 | 71.2% | 79.4% |
| 3314191 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.52 | 42.0 | 2.79e-01 | 90.0% | 90.7% |
| 5053298 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.51 | 38.0 | 3.09e-01 | 80.0% | 92.9% |
D3
medium
residues 110-159
Domain cluster:
rep: IMGVR_UViG_3300038673_000745-3300038673-Ga0416707_000196_74481_75365__D180-235
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wdjA00 | 3.90.1570.10 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A | 0.68 | 59.0 | 4.02e-01 | 100.0% | 96.2% |
| 1n8yC02 | 2.10.220.10 | Mainly Beta › Ribbon › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A domain 2 › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A, domain 2 | 0.61 | 41.0 | 3.11e-01 | 70.0% | 32.8% |
| 2b0uD02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 39.0 | 3.56e-01 | 80.0% | 47.2% |
| 1ultB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.58 | 48.0 | 2.86e-01 | 98.0% | 67.3% |
| 2arpF02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 38.0 | 3.48e-01 | 86.0% | 48.6% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.33e-01 | 74.0% | 56.1% |
| 3nybA01 | 1.10.1410.10 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.56 | 43.0 | 2.97e-01 | 92.0% | 38.5% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 41.0 | 2.94e-01 | 80.0% | 48.0% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 37.0 | 2.24e-01 | 74.0% | 88.8% |
| 4oo2A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 38.0 | 2.61e-01 | 80.0% | 55.8% |
| 7pi0S01 | 1.10.3460.10 | Mainly Alpha › Orthogonal Bundle › Chlorophyll a-b binding protein › Chlorophyll a/b binding protein domain | 0.53 | 38.0 | 2.72e-01 | 84.0% | 29.3% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 34.0 | 3.70e-01 | 72.0% | 87.2% |
| 3h6eA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 40.0 | 2.73e-01 | 94.0% | 97.9% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.02e-01 | 92.0% | 99.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3939832 | 2006.1.6.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb | 0.72 | 51.0 | 3.26e-01 | 76.0% | 32.2% |
| 11035 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.68 | 59.0 | 4.02e-01 | 100.0% | 96.2% |
| 3524961 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.60 | 40.0 | 3.58e-01 | 70.0% | 80.0% |
| 3223744 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.60 | 40.0 | 3.45e-01 | 72.0% | 81.8% |
| 3273078 | 388.1.1.0 ↗ | few secondary structure elements › Huristasin-like › Huristasin-like › Huristasin-like | 0.58 | 39.0 | 3.85e-01 | 72.0% | 63.6% |
| 4447898 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 39.0 | 2.75e-01 | 74.0% | 85.3% |
| 3993240 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.54 | 37.0 | 2.42e-01 | 72.0% | 16.4% |
| 4978893 | 3755.3.1.632 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin | 0.52 | 33.0 | 2.46e-01 | 76.0% | 22.9% |
| 4966971 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 38.0 | 3.74e-01 | 80.0% | 83.6% |
| 3640935 | 3543.1.1.4 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 | 0.52 | 39.0 | 2.58e-01 | 86.0% | 66.8% |
| 4970367 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 38.0 | 2.85e-01 | 90.0% | 65.5% |
| 3193273 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.40e-01 | 96.0% | 59.0% |
D4
medium
residues 249-329
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 44.0 | 4.87e-01 | 81.5% | 86.2% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.62 | 52.0 | 4.76e-01 | 91.4% | 82.7% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.62 | 38.0 | 3.13e-01 | 87.7% | 35.0% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 46.0 | 3.53e-01 | 81.5% | 76.4% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.64e-01 | 82.7% | 90.9% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.60 | 39.0 | 3.94e-01 | 76.5% | 66.3% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.60 | 39.0 | 4.50e-01 | 84.0% | 100.0% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.58 | 40.0 | 3.95e-01 | 87.7% | 64.4% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 51.0 | 3.40e-01 | 100.0% | 36.8% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.58 | 45.0 | 3.97e-01 | 85.2% | 56.7% |
| 2gq1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.57 | 47.0 | 3.65e-01 | 88.9% | 86.5% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 3.96e-01 | 90.1% | 81.1% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.56 | 47.0 | 4.12e-01 | 93.8% | 91.7% |
| 3eb7A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.56 | 43.0 | 3.26e-01 | 82.7% | 73.1% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 48.0 | 3.69e-01 | 97.5% | 59.2% |
| 4b8eB00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.54 | 40.0 | 3.16e-01 | 82.7% | 78.1% |
| 5c33A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.54 | 40.0 | 3.18e-01 | 81.5% | 68.9% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 45.0 | 3.85e-01 | 93.8% | 64.1% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 3.35e-01 | 82.7% | 57.2% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 42.0 | 3.00e-01 | 90.1% | 98.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4342741 | 243.19.1.3 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N | 0.84 | 71.0 | 7.03e-01 | 90.1% | 89.4% |
| 3283450 | 3844.2.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG | 0.68 | 50.0 | 3.51e-01 | 79.0% | 60.4% |
| 5003245 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.64 | 45.0 | 4.82e-01 | 77.8% | 85.7% |
| 3396256 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 51.0 | 4.78e-01 | 86.4% | 93.0% |
| 5007358 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 49.0 | 4.20e-01 | 86.4% | 55.8% |
| 5034929 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.61 | 43.0 | 3.12e-01 | 72.8% | 43.5% |
| 3708732 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 51.0 | 3.45e-01 | 96.3% | 39.4% |
| 2755883 | 331.19.1.1 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin | 0.59 | 41.0 | 3.95e-01 | 87.7% | 63.0% |
| 3932950 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 50.0 | 3.30e-01 | 97.5% | 36.9% |
| 3259314 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.57 | 47.0 | 4.40e-01 | 90.1% | 77.0% |
| 4889562 | 10.1.1.86 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY, RyR | 0.52 | 39.0 | 2.94e-01 | 81.5% | 60.1% |
| 5049779 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 40.0 | 3.19e-01 | 86.4% | 69.1% |
D5
medium
residues 485-570_696-716
Domain cluster:
rep: AY328852.1__AAQ96491.1__X__00024__D88-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07484.18 best | Collar | 84.6 | 5.10e-24 | 54.2% | 100.0% |