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MT740307.1__QNR53950.1__phiK7A1_162__00160

Bact-Vir

MT740307.1__QNR53950.1__phiK7A1_162__00160

Identity

Accession:
MT740307 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Torinovirus› Pseudomonas_phage_phiK7A1

TaxID: 2759194

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-66
PDB
Domain cluster: rep: IMGVR_UViG_3300025630_003131-3300025630-Ga0208004_100049515__D42-103
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 48.0 4.51e-01 98.5% 96.4%
4c2mA04 3.30.1490.180 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase ii 0.56 48.0 4.61e-01 100.0% 89.6%
1guxB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 39.0 3.16e-01 74.2% 54.6%
5d79A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.56 46.0 3.41e-01 92.4% 59.4%
7ct1A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 46.0 4.33e-01 97.0% 97.6%
4chkB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 48.0 4.38e-01 100.0% 86.8%
2vugA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.55 42.0 4.20e-01 95.5% 81.9%
2kcqA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 42.0 3.31e-01 86.4% 94.1%
5feyA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 39.0 3.73e-01 77.3% 64.1%
1g2nA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 43.0 3.04e-01 95.5% 53.3%
3hxlA04 3.30.1370.220 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.53 37.0 3.49e-01 81.8% 60.8%
1g25A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 38.0 3.89e-01 77.3% 78.5%
2lgvA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 37.0 3.30e-01 75.8% 52.0%
2xzmH02 3.30.1490.10 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.52 36.0 3.75e-01 100.0% 82.0%
4r7eA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 35.0 3.45e-01 77.3% 66.7%
3mszB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 38.0 3.48e-01 78.8% 100.0%
4kh9A03 2.60.120.1370 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.79e-01 100.0% 67.3%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 37.0 3.30e-01 81.8% 50.0%
3vw5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 39.0 2.41e-01 80.3% 29.0%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 35.0 3.28e-01 74.2% 57.6%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.50 34.0 3.13e-01 71.2% 84.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3733629 4951.1.1.1 ↗ alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_2 0.62 46.0 4.71e-01 100.0% 83.1%
3689918 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 45.0 4.04e-01 80.3% 56.8%
3203083 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 44.0 3.88e-01 80.3% 57.0%
3600674 275.1.1.0 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.59 42.0 4.50e-01 98.5% 92.7%
3711495 4951.1.1.1 ↗ alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_2 0.58 42.0 4.34e-01 100.0% 86.7%
3669260 192.2.1.35 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Hobbit 0.57 43.0 4.04e-01 83.3% 65.9%
3817993 221.1.1.4 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.57 47.0 3.94e-01 97.0% 65.6%
3703559 4988.1.1.0 ↗ a+b two layers › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain 0.57 37.0 4.12e-01 92.4% 93.8%
3186436 2484.1.1.24 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 47.0 3.64e-01 95.5% 79.4%
3509068 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.56 47.0 3.46e-01 100.0% 34.5%
4304758 2010.1.1.1 ↗ a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV 0.54 42.0 3.18e-01 83.3% 36.8%
3255592 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 45.0 4.20e-01 98.5% 82.2%
3698596 4988.1.1.0 ↗ a+b two layers › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain 0.54 39.0 3.87e-01 100.0% 74.3%
3219471 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 46.0 3.64e-01 100.0% 70.3%
5030584 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 44.0 3.54e-01 93.9% 87.9%
3734205 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.54 41.0 3.04e-01 83.3% 48.9%
3659589 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.53 37.0 3.75e-01 75.8% 73.8%
3926235 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 43.0 4.14e-01 98.5% 98.8%
3211001 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.53 38.0 3.47e-01 77.3% 74.4%
3291545 3859.1.1.0 ↗ alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain 0.53 40.0 3.37e-01 86.4% 75.2%
4182437 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 43.0 3.86e-01 97.0% 82.0%
4971724 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.53 43.0 2.86e-01 100.0% 69.3%
3427173 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.52 35.0 3.55e-01 80.3% 70.8%
4022785 3435.1.1.3 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L 0.52 43.0 3.08e-01 100.0% 32.6%
4012276 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.52 37.0 3.53e-01 77.3% 67.5%
3633950 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 44.0 4.05e-01 98.5% 84.4%
4486492 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.51 41.0 2.78e-01 98.5% 67.9%
4877615 221.1.1.36 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N 0.51 42.0 4.01e-01 98.5% 95.1%
3485296 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.50 38.0 3.26e-01 81.8% 52.4%