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MT740307.1__QNR53951.1__phiK7A1_163__00161

Bact-Vir

MT740307.1__QNR53951.1__phiK7A1_163__00161

Identity

Accession:
MT740307 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Torinovirus› Pseudomonas_phage_phiK7A1

TaxID: 2759194

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-58
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6hxiA01 3.30.470.110 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.68 55.0 3.74e-01 100.0% 24.1%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 53.0 4.50e-01 100.0% 92.3%
3d4rE01 2.40.128.400 Mainly Beta › Beta Barrel › Lipocalin › 0.62 37.0 3.21e-01 100.0% 34.5%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.61 46.0 4.72e-01 100.0% 92.0%
2m9kA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 49.0 4.20e-01 100.0% 83.9%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.57 48.0 3.46e-01 100.0% 46.1%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.56 48.0 4.16e-01 100.0% 90.6%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.56 35.0 3.20e-01 84.6% 42.1%
2r7kA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.55 45.0 4.34e-01 100.0% 78.7%
1f0xA04 3.30.1370.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 0.54 41.0 3.61e-01 86.5% 78.8%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 45.0 3.78e-01 100.0% 79.6%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 44.0 3.62e-01 100.0% 79.6%
3hrzC01 2.20.210.20 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › 0.53 39.0 4.02e-01 100.0% 85.7%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.53 39.0 2.89e-01 84.6% 28.1%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.53 40.0 3.46e-01 100.0% 50.0%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.53 43.0 3.67e-01 100.0% 85.4%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.52 43.0 3.83e-01 100.0% 71.1%
1m4kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.44e-01 94.2% 73.5%
1r8gA00 3.30.590.20 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.51 43.0 2.66e-01 100.0% 59.7%
4pwuC00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 40.0 3.71e-01 100.0% 94.9%
6wqbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 35.0 2.62e-01 75.0% 43.2%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.37e-01 100.0% 45.1%
3lb6D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 3.46e-01 94.2% 81.5%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027350 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.74 58.0 4.31e-01 100.0% 33.3%
4026566 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.71 58.0 3.51e-01 100.0% 14.6%
3703177 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 53.0 4.08e-01 94.2% 96.0%
4990489 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 51.0 5.19e-01 100.0% 96.0%
5034902 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.64 50.0 3.72e-01 100.0% 31.7%
3604593 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 53.0 5.31e-01 100.0% 92.7%
4083034 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.62 54.0 4.29e-01 100.0% 49.1%
4982792 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.60 48.0 3.51e-01 100.0% 30.0%
4448678 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.58 48.0 4.38e-01 100.0% 93.3%
4147528 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.57 48.0 4.44e-01 100.0% 97.1%
4967335 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.56 46.0 4.04e-01 100.0% 97.6%
3925945 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.56 44.0 3.93e-01 100.0% 71.1%
4989477 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.56 46.0 4.11e-01 100.0% 98.8%
4173742 304.117.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.56 46.0 4.22e-01 100.0% 89.3%
3585357 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.55 48.0 3.91e-01 100.0% 61.0%
3756436 304.9.1.120 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4523 0.53 47.0 3.93e-01 100.0% 81.1%
5058967 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.53 46.0 4.09e-01 100.0% 92.0%
3590261 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.52 38.0 3.63e-01 100.0% 66.2%
4019479 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.52 45.0 2.80e-01 100.0% 50.9%
3218195 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 40.0 3.57e-01 94.2% 64.7%
4997114 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.51 42.0 3.21e-01 100.0% 63.6%
4033451 301.13.1.6 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › FakA-like_M 0.51 42.0 3.74e-01 100.0% 78.8%
3896560 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.51 43.0 3.11e-01 100.0% 31.8%
3519392 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 3.65e-01 100.0% 63.2%
3588119 304.117.1.3 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › FakA-like_M 0.51 42.0 3.64e-01 100.0% 77.8%
3384587 323.1.1.7 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase 0.51 39.0 2.57e-01 84.6% 63.4%
1844217 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.50 40.0 3.66e-01 100.0% 91.3%