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MT740307.1__QNR53954.1__phiK7A1_166__00164

Bact-Vir

MT740307.1__QNR53954.1__phiK7A1_166__00164

Identity

Accession:
MT740307 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Torinovirus› Pseudomonas_phage_phiK7A1

TaxID: 2759194

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-69
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rv0B03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 45.0 4.35e-01 83.8% 77.2%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 41.0 3.40e-01 76.5% 81.2%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 40.0 3.30e-01 75.0% 53.0%
4kt3B00 3.10.450.170 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › type vi secretion system effector-immunity co pseudomonas protegens 0.57 46.0 3.74e-01 88.2% 55.5%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 41.0 3.69e-01 82.4% 59.0%
3eeiA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.55 42.0 3.05e-01 88.2% 94.4%
1ujrA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 31.0 2.91e-01 79.4% 42.2%
3qwuA01 3.10.450.740 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 4.08e-01 88.2% 95.7%
3p2mA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 41.0 2.77e-01 85.3% 95.4%
2ljwA00 3.30.428.40 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Protein of unknown function DUF3067 0.53 45.0 3.99e-01 97.1% 79.8%
1z8gA01 3.10.250.10 Alpha Beta › Roll › Mac-2 Binding Protein › SRCR-like domain 0.53 35.0 3.10e-01 73.5% 44.2%
1x9yA01 3.10.500.10 Alpha Beta › Roll › prostaphopain b, domain 1 › Staphopain proregion domain 0.53 44.0 3.45e-01 100.0% 63.5%
2gtiA01 3.30.160.820 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like 0.53 37.0 3.78e-01 73.5% 85.9%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 37.0 3.26e-01 73.5% 80.4%
4g41A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 39.0 2.87e-01 86.8% 91.9%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.51 43.0 4.30e-01 94.1% 94.3%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 34.0 2.96e-01 70.6% 44.9%
7lgjA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.50 40.0 2.85e-01 91.2% 42.4%
3vp7A00 1.10.418.40 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 0.50 40.0 3.12e-01 91.2% 89.2%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.50 36.0 3.41e-01 97.1% 61.9%
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.50 43.0 2.66e-01 100.0% 15.4%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4119222 375.1.1.135 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev 0.69 45.0 4.96e-01 73.5% 90.0%
4964214 375.8.1.1 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B 0.60 36.0 3.92e-01 72.1% 72.7%
4992374 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.57 39.0 3.97e-01 77.9% 73.8%
1088871 213.4.1.1 ↗ a+b three layers › Nat/Ivy › Immunity protein of a type VI secretion system effector › Immunity protein of a type VI secretion system effector › T6SS_Tgi2PP 0.57 46.0 3.74e-01 88.2% 55.5%
5012906 2498.2.1.6 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › S_layer_C 0.57 48.0 3.50e-01 100.0% 83.0%
3921414 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 31.0 3.00e-01 79.4% 43.0%
3296731 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.57 34.0 3.95e-01 83.8% 91.1%
3400449 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 39.0 2.94e-01 73.5% 44.6%
3680934 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 33.0 4.06e-01 70.6% 100.0%
4990102 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 33.0 3.87e-01 83.8% 86.7%
4211411 386.1.1.231 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF2709 0.56 38.0 3.48e-01 72.1% 66.7%
4967355 4100.1.1.3 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.55 38.0 3.85e-01 79.4% 73.8%
3422937 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.55 37.0 3.89e-01 95.6% 80.0%
3347231 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.55 38.0 3.12e-01 72.1% 54.6%
3979087 4100.1.1.7 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › PF27115 0.55 42.0 4.24e-01 88.2% 91.4%
5015133 4100.1.1.9 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.55 37.0 3.86e-01 76.5% 80.0%
4929701 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.54 38.0 3.96e-01 77.9% 83.3%
2417924 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.53 37.0 3.50e-01 73.5% 95.3%
4969162 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.53 36.0 3.78e-01 79.4% 81.7%
5050494 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 35.0 2.92e-01 70.6% 40.0%
4943458 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 35.0 2.96e-01 70.6% 40.0%
1685513 1001.1.1.4 ↗ a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N 0.52 34.0 3.77e-01 85.3% 90.2%
3606666 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.51 33.0 2.72e-01 73.5% 33.8%
4947793 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 2.92e-01 70.6% 40.8%
3968949 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.51 35.0 2.61e-01 100.0% 26.3%
3882660 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.50 38.0 2.54e-01 83.8% 32.1%
5014250 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 38.0 3.67e-01 83.8% 77.5%
1686589 1001.1.1.4 ↗ a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N 0.50 34.0 3.70e-01 86.8% 92.3%
4001056 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.50 35.0 3.12e-01 73.5% 55.0%