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MT740307.1__QNR53960.1__phiK7A1_172__00170
Bact-VirMT740307.1__QNR53960.1__phiK7A1_172__00170
Identity
- Accession:
- MT740307 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Torinovirus›
Pseudomonas_phage_phiK7A1
TaxID: 2759194
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-43
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ifuA01 | 4.10.80.390 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.69 | 41.0 | 3.94e-01 | 72.1% | 49.0% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.68 | 46.0 | 4.89e-01 | 95.3% | 91.2% |
| 3nw0A03 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 50.0 | 4.57e-01 | 90.7% | 67.2% |
| 2vg9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.59 | 41.0 | 2.61e-01 | 74.4% | 20.7% |
| 1mehA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 41.0 | 2.47e-01 | 76.7% | 13.8% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.58 | 39.0 | 3.45e-01 | 90.7% | 43.1% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.55 | 42.0 | 2.64e-01 | 90.7% | 55.8% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.54 | 44.0 | 3.50e-01 | 95.3% | 44.1% |
| 1aa0A00 | 1.20.5.320 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 | 0.53 | 33.0 | 2.47e-01 | 79.1% | 19.5% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.52 | 43.0 | 3.26e-01 | 93.0% | 76.2% |
| 7bexA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 2.97e-01 | 100.0% | 55.7% |
| 2yrtA00 | 4.10.1130.20 | Few Secondary Structures › Irregular › btk motif of tyrosine-protein kinase itk › | 0.51 | 38.0 | 3.31e-01 | 86.0% | 62.7% |
| 2k4xA01 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.51 | 34.0 | 3.53e-01 | 86.0% | 80.0% |
| 2p62A01 | 3.40.50.10620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains | 0.51 | 38.0 | 2.82e-01 | 93.0% | 44.6% |
| 2g7cB01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.51 | 37.0 | 3.21e-01 | 79.1% | 69.7% |
| 5jy6B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 40.0 | 2.84e-01 | 100.0% | 52.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4058862 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.79 | 59.0 | 6.34e-01 | 93.0% | 100.0% |
| 4990429 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 68.0 | 3.89e-01 | 93.0% | 74.4% |
| 4674239 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.78 | 58.0 | 6.29e-01 | 95.3% | 100.0% |
| 4929700 | 529.1.1.0 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) | 0.76 | 64.0 | 4.99e-01 | 100.0% | 44.4% |
| 5002533 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 58.0 | 4.31e-01 | 88.4% | 87.6% |
| 4218543 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 56.0 | 5.79e-01 | 93.0% | 95.0% |
| 3710673 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.70 | 56.0 | 3.49e-01 | 97.7% | 15.6% |
| 4161357 | 375.14.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS2) | 0.70 | 53.0 | 5.45e-01 | 97.7% | 90.0% |
| 4140141 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.69 | 53.0 | 5.48e-01 | 97.7% | 92.5% |
| 4261213 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.69 | 52.0 | 3.06e-01 | 97.7% | 10.0% |
| 4982959 | 3922.1.1.357 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Auto_anti-p27 | 0.68 | 50.0 | 3.84e-01 | 100.0% | 34.0% |
| 3207082 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.67 | 57.0 | 5.33e-01 | 97.7% | 100.0% |
| 5047258 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 45.0 | 4.72e-01 | 90.7% | 85.7% |
| 4036787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 53.0 | 5.32e-01 | 97.7% | 86.7% |
| 3467249 | 376.1.4.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › PF26200 | 0.67 | 50.0 | 4.32e-01 | 93.0% | 52.3% |
| 3936917 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.67 | 50.0 | 5.34e-01 | 93.0% | 100.0% |
| 4310743 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.66 | 55.0 | 5.47e-01 | 97.7% | 91.1% |
| 3739257 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 48.0 | 5.09e-01 | 88.4% | 100.0% |
| 5047273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 49.0 | 5.12e-01 | 95.3% | 87.5% |
| 3867678 | 376.1.4.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › PF26200 | 0.65 | 48.0 | 4.18e-01 | 93.0% | 52.3% |
| 4624487 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.64 | 47.0 | 4.96e-01 | 93.0% | 100.0% |
| 3270929 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.64 | 50.0 | 4.33e-01 | 95.3% | 55.4% |
| 3537482 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.64 | 48.0 | 4.56e-01 | 95.3% | 70.0% |
| 3999078 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.63 | 46.0 | 4.90e-01 | 93.0% | 100.0% |
| 3591420 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 4.77e-01 | 90.7% | 77.8% |
| 3784620 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.63 | 49.0 | 4.55e-01 | 95.3% | 63.6% |
| 3990000 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.62 | 47.0 | 4.42e-01 | 86.0% | 76.4% |
| 4011582 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.62 | 44.0 | 3.86e-01 | 93.0% | 50.8% |
| 3891437 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.61 | 44.0 | 4.13e-01 | 95.3% | 61.8% |
| 3873729 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.57 | 43.0 | 3.72e-01 | 95.3% | 52.9% |
| 3890519 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 39.0 | 3.31e-01 | 97.7% | 42.7% |
| 3406961 | 376.1.6.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR_1 | 0.56 | 50.0 | 4.33e-01 | 100.0% | 80.0% |
| 3688360 | 386.1.1.345 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF28347 | 0.56 | 41.0 | 4.06e-01 | 95.3% | 75.6% |
| 3734604 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.55 | 41.0 | 3.72e-01 | 95.3% | 60.0% |
| 223484 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.52 | 43.0 | 3.26e-01 | 93.0% | 76.2% |
| 3577711 | 3246.1.1.0 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins | 0.52 | 39.0 | 3.36e-01 | 83.7% | 93.3% |
| 3559714 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.51 | 35.0 | 3.51e-01 | 76.7% | 86.7% |
| 3510894 | 844.1.1.1 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub | 0.51 | 36.0 | 2.37e-01 | 81.4% | 21.7% |
| 9934 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.50 | 37.0 | 2.83e-01 | 93.0% | 48.6% |