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MT747435.1__QNR52572.1__X__00033
Bact-VirMT747435.1__QNR52572.1__X__00033
Identity
- Accession:
- MT747435 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-66
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iu0A00 | 3.90.1360.10 | Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase | 0.71 | 61.0 | 3.78e-01 | 98.4% | 29.4% |
| 4heoA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.68 | 45.0 | 4.73e-01 | 73.8% | 76.4% |
| 2a5yB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.67 | 53.0 | 4.40e-01 | 90.2% | 48.6% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.66 | 50.0 | 3.78e-01 | 85.2% | 96.9% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 44.0 | 4.56e-01 | 73.8% | 78.2% |
| 3vzbB02 | 2.60.200.40 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.64 | 45.0 | 3.18e-01 | 75.4% | 64.3% |
| 4f91B04 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.63 | 53.0 | 4.18e-01 | 100.0% | 84.5% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 43.0 | 4.07e-01 | 73.8% | 59.0% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.62 | 52.0 | 4.20e-01 | 100.0% | 70.1% |
| 3p01A01 | 6.10.140.590 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 48.0 | 4.41e-01 | 86.9% | 73.5% |
| 6gc1A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 50.0 | 3.51e-01 | 88.5% | 92.7% |
| 3bbzA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.62 | 41.0 | 4.43e-01 | 73.8% | 87.5% |
| 1dd9A03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.61 | 43.0 | 4.44e-01 | 77.0% | 91.5% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 46.0 | 3.99e-01 | 85.2% | 58.2% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.29e-01 | 93.4% | 60.4% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.60 | 48.0 | 4.79e-01 | 91.8% | 98.4% |
| 2g7rA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 46.0 | 4.14e-01 | 86.9% | 61.6% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 49.0 | 4.46e-01 | 100.0% | 75.9% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 44.0 | 3.12e-01 | 83.6% | 50.7% |
| 6pw7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.58 | 48.0 | 4.68e-01 | 98.4% | 93.0% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.56 | 45.0 | 4.01e-01 | 90.2% | 68.1% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.56 | 42.0 | 3.23e-01 | 82.0% | 43.6% |
| 7wf8B01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.56 | 40.0 | 3.36e-01 | 80.3% | 54.5% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.56 | 38.0 | 3.37e-01 | 72.1% | 47.4% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.54 | 41.0 | 3.90e-01 | 85.2% | 72.4% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 37.0 | 3.00e-01 | 73.8% | 53.7% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 46.0 | 3.40e-01 | 96.7% | 58.7% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.08e-01 | 96.7% | 75.5% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.52 | 42.0 | 3.42e-01 | 100.0% | 65.5% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 40.0 | 2.88e-01 | 93.4% | 38.0% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 39.0 | 3.30e-01 | 90.2% | 98.2% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 38.0 | 3.61e-01 | 85.2% | 95.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3450460 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 54.0 | 5.16e-01 | 73.8% | 95.7% |
| 3455143 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.72 | 62.0 | 5.66e-01 | 100.0% | 81.2% |
| 3438653 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.71 | 62.0 | 5.87e-01 | 100.0% | 92.0% |
| 4436102 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 55.0 | 5.57e-01 | 91.8% | 90.0% |
| 4034224 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.66 | 45.0 | 4.26e-01 | 72.1% | 88.0% |
| 3650787 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.66 | 55.0 | 3.43e-01 | 93.4% | 25.6% |
| 3875941 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.65 | 49.0 | 3.58e-01 | 80.3% | 62.4% |
| 3603687 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.65 | 42.0 | 4.17e-01 | 73.8% | 62.5% |
| 3240892 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.65 | 48.0 | 4.21e-01 | 78.7% | 63.3% |
| 3994165 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.65 | 56.0 | 5.18e-01 | 100.0% | 97.5% |
| 3992031 | 548.1.1.0 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain | 0.65 | 48.0 | 5.13e-01 | 83.6% | 100.0% |
| 4000385 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.64 | 50.0 | 3.32e-01 | 100.0% | 19.6% |
| 3431383 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.63 | 54.0 | 3.27e-01 | 96.7% | 21.2% |
| 185069 | 632.3.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › Paramyx_P_V_C | 0.62 | 41.0 | 4.43e-01 | 73.8% | 87.5% |
| 5042711 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 49.0 | 3.92e-01 | 96.7% | 48.3% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 52.0 | 4.39e-01 | 100.0% | 57.1% |
| 3386319 | 503.1.1.0 ↗ | extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein | 0.60 | 50.0 | 4.35e-01 | 96.7% | 83.0% |
| 5041309 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.60 | 48.0 | 3.62e-01 | 93.4% | 86.3% |
| 5072225 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 4.97e-01 | 100.0% | 96.7% |
| 3947745 | 3938.1.1.0 ↗ | alpha arrays › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain | 0.57 | 39.0 | 3.87e-01 | 72.1% | 95.4% |
| 4964135 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.57 | 43.0 | 3.65e-01 | 80.3% | 75.0% |
| 4931893 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.55 | 39.0 | 3.42e-01 | 75.4% | 74.0% |
| 4446039 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 34.0 | 3.26e-01 | 70.5% | 57.1% |
| 4936497 | 150.1.1.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like | 0.51 | 36.0 | 3.31e-01 | 77.0% | 81.8% |
| 4950274 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.51 | 35.0 | 3.12e-01 | 75.4% | 73.7% |