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UXF50686.1

Arc-Vir

MT764228__UXF50686.1__7908G4D2-48__00048

Identity

Accession:
MT764228 ↗
Protein ID:
UXF50686.1 ↗
Kingdom:
archaea

Quality

72.2 mean pLDDT

Taxonomy

TaxID: 2768784

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-74
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.75 60.0 4.44e-01 86.5% 43.7%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 61.0 3.69e-01 98.1% 61.8%
1wxcB01 3.30.1880.10 Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like 0.70 55.0 5.19e-01 84.6% 95.2%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.69 59.0 5.12e-01 100.0% 97.6%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 49.0 4.03e-01 84.6% 64.8%
5d3xB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 47.0 3.53e-01 78.8% 42.6%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.66 52.0 4.52e-01 86.5% 67.1%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 50.0 3.07e-01 84.6% 22.6%
2m87A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 4.57e-01 98.1% 92.2%
1kgsA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.59e-01 98.1% 95.9%
1rwiA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 51.0 3.32e-01 92.3% 36.3%
4uhtA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 4.39e-01 98.1% 98.0%
3kf3A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.63 53.0 3.76e-01 100.0% 60.5%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 44.0 3.51e-01 78.8% 44.6%
2vhjA02 2.30.270.20 Mainly Beta › Roll › duf1285 protein fold › 0.62 40.0 3.78e-01 90.4% 54.8%
2qq6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 52.0 4.08e-01 98.1% 99.1%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.60e-01 82.7% 51.9%
5crwA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 43.0 3.35e-01 78.8% 85.7%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.59 48.0 4.04e-01 100.0% 84.0%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 48.0 2.89e-01 94.2% 42.5%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 43.0 3.66e-01 84.6% 59.6%
1ojtA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 48.0 3.79e-01 100.0% 76.2%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 48.0 3.00e-01 100.0% 86.8%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 35.0 3.40e-01 100.0% 55.0%
3zssA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 43.0 3.62e-01 84.6% 80.0%
3h5eA00 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.56 43.0 3.27e-01 94.2% 74.7%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 37.0 2.92e-01 71.2% 63.1%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.55 37.0 3.50e-01 82.7% 56.1%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 40.0 3.83e-01 84.6% 89.4%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 43.0 4.22e-01 94.2% 86.0%
2zwrB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 40.0 2.74e-01 84.6% 27.1%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 41.0 2.65e-01 90.4% 82.7%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.53 40.0 3.59e-01 82.7% 89.9%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 41.0 3.01e-01 86.5% 65.8%
3iwaA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 42.0 2.83e-01 92.3% 24.5%
1vclA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 41.0 3.30e-01 100.0% 95.5%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 41.0 3.48e-01 96.2% 62.1%
1v7lA01 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.52 37.0 2.85e-01 84.6% 51.6%
7ewsB02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.52 42.0 2.77e-01 94.2% 92.2%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.52 42.0 3.03e-01 96.2% 34.3%
3mcbB00 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.52 38.0 3.77e-01 82.7% 91.4%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 41.0 2.69e-01 92.3% 22.2%
1p50A02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.51 42.0 2.77e-01 98.1% 54.6%
1q1rA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.51 39.0 3.37e-01 90.4% 62.1%
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.55e-01 100.0% 84.6%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.23e-01 100.0% 100.0%
2hcuA00 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.50 38.0 2.80e-01 92.3% 67.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.70 61.0 5.24e-01 100.0% 95.3%
3628549 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 47.0 3.15e-01 71.2% 84.7%
4627523 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.69 44.0 3.83e-01 100.0% 45.3%
3963978 234.3.1.0 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.67 52.0 4.27e-01 84.6% 50.5%
3974441 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.67 59.0 4.59e-01 98.1% 90.9%
3512945 2485.1.1.109 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26957 0.67 47.0 3.50e-01 75.0% 88.5%
5064396 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.67 54.0 3.37e-01 100.0% 74.4%
3239717 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.66 56.0 3.77e-01 100.0% 33.0%
3593362 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.65 45.0 3.96e-01 75.0% 49.4%
4946049 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.65 46.0 4.00e-01 75.0% 50.0%
3234953 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.63 56.0 3.72e-01 100.0% 40.5%
3507017 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.63 54.0 4.36e-01 96.2% 100.0%
3595586 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 51.0 2.99e-01 92.3% 12.3%
5068496 5.1.4.471 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NHL 0.62 51.0 2.96e-01 100.0% 42.6%
3600232 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.62 53.0 3.54e-01 100.0% 25.0%
3281754 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.61 52.0 4.14e-01 100.0% 90.4%
5049843 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 49.0 3.16e-01 94.2% 17.6%
3928378 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 50.0 4.40e-01 98.1% 69.4%
3386347 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.60 47.0 3.96e-01 90.4% 100.0%
3973953 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.59 42.0 3.55e-01 86.5% 41.0%
3855607 2485.1.1.122 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin, Thioredoxin_6 0.59 42.0 2.67e-01 76.9% 66.0%
3520852 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 47.0 3.61e-01 100.0% 67.3%
3929686 2485.1.1.109 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26957 0.58 43.0 3.08e-01 80.8% 87.7%
4014623 2485.1.1.43 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 0.58 42.0 3.20e-01 78.8% 80.8%
4617429 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 46.0 4.56e-01 100.0% 89.1%
3231261 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 46.0 3.12e-01 100.0% 22.4%
4306325 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.58 44.0 3.29e-01 88.5% 38.7%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 48.0 3.19e-01 100.0% 22.8%
5025277 284.1.1.13 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP-like_N 0.58 48.0 4.76e-01 98.1% 92.7%
1489671 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.56 45.0 4.51e-01 100.0% 92.9%
3405890 5.1.3.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP 0.56 46.0 2.90e-01 98.1% 68.0%
5079725 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 39.0 3.73e-01 73.1% 73.3%
3858714 3124.1.1.1 beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC 0.55 38.0 3.67e-01 73.1% 88.3%
3884178 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.55 41.0 3.75e-01 100.0% 60.0%
4389625 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.54 43.0 4.33e-01 100.0% 92.7%
3177701 3124.1.1.1 beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC 0.54 38.0 3.21e-01 73.1% 60.0%
5032062 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 46.0 3.26e-01 100.0% 69.4%
4275625 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.54 42.0 4.17e-01 100.0% 88.3%
4929702 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 4.02e-01 94.2% 88.0%
4933213 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.52 38.0 3.56e-01 80.8% 81.4%
5071702 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.52 42.0 3.41e-01 100.0% 75.8%
3623290 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.51 42.0 3.71e-01 98.1% 95.3%
4226935 298.4.1.1 a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E 0.51 35.0 2.44e-01 82.7% 20.0%
3249562 2485.1.1.43 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 0.51 39.0 3.04e-01 84.6% 89.2%
4526391 298.4.1.1 a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E 0.51 35.0 2.72e-01 82.7% 30.4%
3941320 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.51 37.0 3.40e-01 82.7% 84.0%
3781869 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.51 41.0 3.18e-01 100.0% 93.6%
2132 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.50 38.0 3.02e-01 90.4% 99.2%
3462226 2485.1.1.90 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredox_PDIA6_C 0.50 38.0 3.02e-01 90.4% 92.3%
3268368 7022.1.1.1 alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.50 40.0 2.41e-01 92.3% 82.2%