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UXF50848.1
Arc-VirMT764231__UXF50848.1__HQRvContig01-40__00040
Identity
- Accession:
- MT764231 ↗
- Protein ID:
- UXF50848.1 ↗
- Kingdom:
- archaea
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-53
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09954.15 best | DUF2188 | 22.5 | 1.40e-04 | 98.0% | 72.6% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.78 | 63.0 | 5.65e-01 | 88.2% | 71.8% |
| 3ggmA00 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.67 | 56.0 | 4.97e-01 | 100.0% | 64.0% |
| 1w4vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 51.0 | 4.08e-01 | 86.3% | 80.0% |
| 3a8pB01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 54.0 | 4.19e-01 | 92.2% | 43.1% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.66 | 53.0 | 4.42e-01 | 94.1% | 92.7% |
| 3icjA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.66 | 56.0 | 4.94e-01 | 100.0% | 64.6% |
| 4s39A02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.66 | 52.0 | 4.09e-01 | 92.2% | 43.1% |
| 7kfuC01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.65 | 47.0 | 4.13e-01 | 100.0% | 52.0% |
| 3hz4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 51.0 | 4.01e-01 | 92.2% | 75.8% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 51.0 | 4.06e-01 | 92.2% | 44.0% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.63 | 53.0 | 3.89e-01 | 100.0% | 39.0% |
| 5yrzA01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 51.0 | 4.26e-01 | 100.0% | 89.5% |
| 4euyA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 48.0 | 4.11e-01 | 86.3% | 89.5% |
| 2qh9A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.62 | 53.0 | 3.74e-01 | 100.0% | 34.8% |
| 4i6xA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 47.0 | 3.68e-01 | 84.3% | 79.5% |
| 2cocA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 48.0 | 4.00e-01 | 92.2% | 49.0% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.61 | 51.0 | 3.09e-01 | 100.0% | 18.0% |
| 1vwxk00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.61 | 48.0 | 4.43e-01 | 100.0% | 68.1% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 46.0 | 3.03e-01 | 84.3% | 22.4% |
| 5g5tA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 48.0 | 3.34e-01 | 100.0% | 30.4% |
| 3kgkB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 47.0 | 3.89e-01 | 92.2% | 86.7% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 48.0 | 3.82e-01 | 92.2% | 86.5% |
| 3ed4C01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.57 | 45.0 | 2.82e-01 | 100.0% | 18.5% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 42.0 | 3.54e-01 | 88.2% | 79.4% |
| 1e2tA02 | 3.30.1120.150 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 38.0 | 3.21e-01 | 72.5% | 45.3% |
| 4akgA04 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.53 | 39.0 | 2.85e-01 | 88.2% | 26.9% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 2.93e-01 | 80.4% | 51.5% |
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.51 | 40.0 | 3.72e-01 | 90.2% | 83.8% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.51 | 38.0 | 2.77e-01 | 88.2% | 26.9% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 37.0 | 3.46e-01 | 100.0% | 60.8% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 35.0 | 3.25e-01 | 80.4% | 100.0% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2722070 | 301.13.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › FakA-like_C | 0.77 | 67.0 | 5.31e-01 | 100.0% | 93.3% |
| 3598085 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.76 | 66.0 | 5.33e-01 | 100.0% | 84.0% |
| 4826872 | 2010.1.1.4 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › FakA-like_C | 0.75 | 65.0 | 5.23e-01 | 100.0% | 95.1% |
| 4336618 | 301.13.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › FakA-like_C | 0.75 | 66.0 | 5.18e-01 | 100.0% | 91.7% |
| 4965674 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.74 | 56.0 | 5.72e-01 | 86.3% | 84.0% |
| 3477246 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.73 | 58.0 | 4.25e-01 | 90.2% | 39.3% |
| 4995647 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.69 | 53.0 | 5.24e-01 | 100.0% | 78.2% |
| 4932113 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.68 | 49.0 | 5.13e-01 | 98.0% | 86.7% |
| 4019052 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.67 | 59.0 | 5.61e-01 | 100.0% | 88.3% |
| 5033135 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.67 | 48.0 | 5.01e-01 | 100.0% | 86.7% |
| 5023720 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.67 | 48.0 | 5.04e-01 | 96.1% | 86.7% |
| 4660286 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.67 | 48.0 | 5.03e-01 | 100.0% | 86.7% |
| 4990801 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.67 | 47.0 | 4.93e-01 | 100.0% | 86.7% |
| 3620776 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.66 | 50.0 | 4.70e-01 | 100.0% | 66.2% |
| 3888963 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 52.0 | 3.25e-01 | 92.2% | 14.7% |
| 1235605 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.66 | 56.0 | 5.28e-01 | 100.0% | 79.7% |
| 3922774 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.66 | 50.0 | 5.07e-01 | 100.0% | 86.0% |
| 3870917 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 52.0 | 3.72e-01 | 92.2% | 28.5% |
| 4096988 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 52.0 | 3.41e-01 | 92.2% | 20.0% |
| 4940111 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.65 | 47.0 | 4.96e-01 | 100.0% | 88.9% |
| 4583884 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.65 | 51.0 | 3.96e-01 | 92.2% | 43.2% |
| 3732098 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.65 | 57.0 | 5.28e-01 | 100.0% | 83.1% |
| 4108971 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.65 | 51.0 | 4.02e-01 | 90.2% | 41.7% |
| 4945927 | 65.1.1.10 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_3 | 0.64 | 54.0 | 4.50e-01 | 100.0% | 52.6% |
| 3192572 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.64 | 56.0 | 5.35e-01 | 100.0% | 93.3% |
| 3923660 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 49.0 | 5.09e-01 | 98.0% | 97.8% |
| 4957338 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 51.0 | 3.87e-01 | 94.1% | 96.9% |
| 4540866 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.62 | 52.0 | 4.94e-01 | 100.0% | 81.7% |
| 3578128 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 47.0 | 4.66e-01 | 92.2% | 78.2% |
| 1029 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.62 | 52.0 | 4.77e-01 | 100.0% | 85.7% |
| 3271575 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 47.0 | 3.49e-01 | 90.2% | 33.5% |
| 2472947 | 2485.1.1.41 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 | 0.61 | 48.0 | 3.31e-01 | 90.2% | 82.1% |
| 3236050 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.60 | 47.0 | 3.84e-01 | 92.2% | 49.1% |
| 3516442 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.60 | 47.0 | 3.81e-01 | 92.2% | 78.3% |
| 5078006 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.60 | 51.0 | 4.56e-01 | 92.2% | 71.4% |
| 4979174 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.60 | 47.0 | 4.59e-01 | 100.0% | 81.7% |
| 3487549 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 43.0 | 2.33e-01 | 76.5% | 14.0% |
| 3529782 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 48.0 | 3.73e-01 | 92.2% | 41.7% |
| 3394213 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.58 | 43.0 | 4.24e-01 | 100.0% | 72.7% |
| 5044845 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.58 | 49.0 | 4.68e-01 | 100.0% | 81.7% |
| 4311777 | 6129.1.1.0 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family | 0.58 | 50.0 | 3.15e-01 | 100.0% | 24.4% |
| None | — | 0.58 | 50.0 | 3.17e-01 | 100.0% | 24.4% | |
| 3940927 | 6129.1.1.10 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › DUF7658 | 0.57 | 49.0 | 3.01e-01 | 100.0% | 19.9% |
| 3516953 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 48.0 | 3.23e-01 | 100.0% | 29.1% |
| 4609836 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 46.0 | 4.02e-01 | 96.1% | 88.2% |
| 4544218 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.56 | 38.0 | 2.87e-01 | 70.6% | 76.9% |
| 3559299 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 43.0 | 3.35e-01 | 92.2% | 36.9% |
| 4972318 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 42.0 | 3.62e-01 | 92.2% | 88.2% |
| 5024562 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.53 | 40.0 | 3.06e-01 | 86.3% | 68.9% |
| 5025956 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 38.0 | 2.94e-01 | 90.2% | 92.7% |
| 3923173 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.51 | 40.0 | 3.77e-01 | 88.2% | 90.8% |
| 3759683 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.50 | 38.0 | 2.39e-01 | 84.3% | 28.5% |
| 4967964 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.50 | 37.0 | 2.98e-01 | 88.2% | 75.2% |
| 4188217 | 109.1.1.29 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Tom37+GST_C_6 | 0.50 | 42.0 | 2.72e-01 | 100.0% | 60.4% |