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UXF51009.1

Arc-Vir

MT764234__UXF51009.1__HQRvContig04-22__00022

Identity

Accession:
MT764234 ↗
Protein ID:
UXF51009.1 ↗
Kingdom:
archaea

Quality

85.9 mean pLDDT

Taxonomy

Haloquadratum_phage_sp.

TaxID: 2768784

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-55
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09954.15 best DUF2188 31.1 3.00e-07 98.0% 75.8%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ag6D01 6.10.140.2170 Special › Helix non-globular › Helix Hairpins › 0.65 46.0 3.96e-01 100.0% 48.1%
3htvA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 4.26e-01 100.0% 94.6%
3on1A00 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.63 42.0 3.42e-01 70.0% 51.5%
3g87A01 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.60 50.0 3.35e-01 100.0% 93.3%
6yuqA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 45.0 2.95e-01 86.0% 46.1%
4rshA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.58 51.0 3.50e-01 100.0% 53.1%
1gy8D02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 3.23e-01 100.0% 42.6%
1sb8A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 3.14e-01 98.0% 41.9%
4fe7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 3.36e-01 86.0% 83.2%
1bxiA00 1.10.1200.20 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Colicin E immunity protein 0.56 45.0 3.94e-01 96.0% 95.2%
3fynA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 44.0 3.22e-01 90.0% 66.4%
1tufA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.56 47.0 3.00e-01 96.0% 39.1%
4q7qB00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 44.0 2.85e-01 90.0% 98.8%
2gfqA02 3.40.50.10700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like 0.56 46.0 3.93e-01 100.0% 94.3%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.55 45.0 4.39e-01 100.0% 96.5%
7pk0A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 43.0 3.28e-01 90.0% 67.7%
2pt7G01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.55 44.0 3.89e-01 100.0% 59.0%
1nmnA00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.55 47.0 3.62e-01 100.0% 75.0%
4lq6A00 3.40.630.40 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases 0.55 45.0 3.08e-01 100.0% 45.1%
2iu4A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.54 44.0 3.17e-01 98.0% 61.4%
1f20A01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.54 43.0 3.20e-01 100.0% 65.0%
1dxyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 3.09e-01 86.0% 55.6%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 4.15e-01 100.0% 80.3%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.53 46.0 3.58e-01 100.0% 84.3%
3dc7A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 46.0 3.08e-01 100.0% 44.1%
7b3aA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 46.0 3.29e-01 100.0% 47.7%
1a9xA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 42.0 3.38e-01 100.0% 74.1%
1sqgA04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 2.94e-01 100.0% 62.6%
5v07Z01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.50 41.0 2.86e-01 100.0% 69.4%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036986 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.71 48.0 4.54e-01 70.0% 98.3%
3219484 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.68 57.0 4.65e-01 100.0% 51.0%
3599967 3203.1.1.0 ↗ a+b two layers › Putative oxidoreductase › Putative oxidoreductase › Putative oxidoreductase 0.63 53.0 5.00e-01 100.0% 95.3%
3980976 213.1.1.92 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Mig-14 0.62 49.0 3.40e-01 86.0% 64.4%
4957434 213.5.1.1 ↗ a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.62 46.0 3.73e-01 100.0% 40.0%
4980111 213.1.1.68 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Rv0428c_C 0.62 47.0 3.80e-01 84.0% 60.0%
4304127 2484.6.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD 0.60 52.0 4.34e-01 100.0% 60.0%
4019852 213.1.1.5 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS 0.60 49.0 3.31e-01 90.0% 58.9%
4453799 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.60 49.0 2.97e-01 100.0% 41.5%
4025837 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.59 41.0 3.39e-01 72.0% 60.0%
3480984 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.59 46.0 2.58e-01 86.0% 23.8%
5028863 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.58 51.0 3.17e-01 100.0% 34.9%
3283240 2006.1.4.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N 0.57 49.0 3.30e-01 98.0% 69.2%
4962640 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.57 48.0 3.11e-01 100.0% 41.9%
4951564 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.56 48.0 2.92e-01 100.0% 36.7%
2393176 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.56 47.0 2.96e-01 100.0% 31.9%
4026296 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 46.0 2.92e-01 100.0% 46.8%
5026966 327.18.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.56 38.0 3.23e-01 100.0% 37.9%
3962888 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.55 46.0 2.84e-01 100.0% 31.9%
2391043 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.55 45.0 3.20e-01 98.0% 55.3%
None — 0.55 43.0 2.63e-01 86.0% 15.5%
4107914 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 43.0 2.82e-01 92.0% 56.1%
4362907 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.53 44.0 3.53e-01 98.0% 91.8%
4928575 2002.3.1.2 ↗ a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.53 42.0 2.82e-01 94.0% 95.4%
3620187 2003.1.1.72 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd 0.53 44.0 2.72e-01 96.0% 28.9%