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MT764845.1__QNN99771.1__P67b_00012__00012

Bact-Vir

MT764845.1__QNN99771.1__P67b_00012__00012

Identity

Accession:
MT764845 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-93
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.67 52.0 4.09e-01 81.8% 42.4%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 49.0 4.15e-01 77.3% 48.9%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 49.0 4.09e-01 77.3% 50.0%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.66 49.0 4.47e-01 77.3% 61.9%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.66 48.0 3.71e-01 76.1% 37.5%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 47.0 3.92e-01 76.1% 45.1%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 46.0 4.04e-01 76.1% 51.2%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.64 44.0 3.87e-01 73.9% 49.2%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 47.0 3.93e-01 77.3% 50.3%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 44.0 3.69e-01 71.6% 43.2%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 44.0 3.73e-01 77.3% 44.1%
3mqzA00 3.30.930.20 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 0.63 56.0 4.29e-01 100.0% 70.2%
7vpjA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.62 54.0 4.28e-01 97.7% 77.0%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 54.0 3.56e-01 98.9% 95.1%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 44.0 3.72e-01 76.1% 49.3%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 44.0 3.74e-01 75.0% 50.3%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 45.0 3.63e-01 77.3% 42.4%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 45.0 3.92e-01 77.3% 88.0%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 42.0 3.62e-01 76.1% 44.8%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.61 43.0 3.85e-01 75.0% 55.5%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 42.0 3.66e-01 73.9% 97.9%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 43.0 3.62e-01 75.0% 50.0%
2bujB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 41.0 4.02e-01 70.5% 93.6%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.59 44.0 3.64e-01 80.7% 96.3%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 41.0 3.74e-01 73.9% 91.7%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 44.0 3.85e-01 79.5% 96.9%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 43.0 4.64e-01 78.4% 97.4%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.57 52.0 4.43e-01 100.0% 75.0%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.57 49.0 3.54e-01 96.6% 94.3%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 49.0 3.33e-01 98.9% 55.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.56 45.0 3.88e-01 90.9% 74.7%
2iecD00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.56 41.0 3.78e-01 77.3% 66.7%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.56 46.0 3.79e-01 89.8% 77.6%
2ehgA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 38.0 3.25e-01 75.0% 42.3%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 42.0 3.63e-01 83.0% 80.1%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.55 44.0 3.57e-01 89.8% 89.3%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 38.0 3.83e-01 73.9% 100.0%
2x12A01 2.60.40.2010 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.33e-01 85.2% 76.8%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.54 48.0 3.99e-01 97.7% 58.9%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 40.0 3.55e-01 78.4% 87.9%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 40.0 3.04e-01 83.0% 34.5%
3el6A00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 43.0 3.17e-01 95.5% 77.9%
2x9oA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.52 45.0 3.39e-01 100.0% 70.4%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 42.0 3.59e-01 100.0% 83.0%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 36.0 2.65e-01 76.1% 98.4%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3291496 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.74 60.0 4.29e-01 87.5% 46.6%
3279448 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.71 52.0 4.45e-01 76.1% 64.7%
3984944 213.2.1.0 a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy 0.68 45.0 4.57e-01 73.9% 69.4%
3288058 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.67 48.0 4.02e-01 75.0% 47.6%
408353 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.65 47.0 3.93e-01 76.1% 45.4%
3290861 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 45.0 3.97e-01 72.7% 73.8%
4934107 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.64 45.0 3.73e-01 73.9% 54.2%
5025792 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.64 52.0 4.73e-01 97.7% 67.0%
11121 213.2.1.1 a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy › Ivy 0.64 44.0 3.88e-01 73.9% 49.6%
11122 213.2.1.1 a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy › Ivy 0.63 46.0 4.03e-01 75.0% 55.0%
3288437 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.63 46.0 3.88e-01 77.3% 45.3%
5079230 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.62 55.0 5.24e-01 100.0% 85.7%
3356246 5084.5.1.45 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28482 0.62 45.0 3.34e-01 77.3% 30.8%
1710650 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.62 45.0 4.32e-01 86.4% 65.7%
3740888 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.62 43.0 3.58e-01 73.9% 40.0%
3278661 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.61 44.0 3.65e-01 76.1% 42.5%
3959660 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.61 44.0 3.78e-01 76.1% 50.3%
6334 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.61 44.0 3.76e-01 76.1% 51.0%
4008120 5.1.5.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.61 45.0 4.05e-01 98.9% 56.7%
4929336 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 44.0 3.62e-01 76.1% 45.8%
3278805 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.60 44.0 3.76e-01 77.3% 50.3%
3176554 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.60 50.0 3.51e-01 90.9% 51.6%
3229636 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.60 43.0 3.39e-01 76.1% 44.9%
3736378 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 52.0 3.32e-01 97.7% 34.3%
3032521 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.59 51.0 3.47e-01 96.6% 50.1%
2410020 881.1.1.4 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB 0.59 49.0 4.17e-01 92.0% 54.7%
3181792 331.3.1.6 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.59 43.0 3.30e-01 77.3% 44.0%
3806989 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.58 50.0 3.55e-01 96.6% 75.8%
144571 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.58 42.0 3.47e-01 78.4% 46.4%
4994698 4041.1.1.0 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.58 49.0 3.76e-01 92.0% 86.7%
4027918 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.58 51.0 4.19e-01 98.9% 56.9%
3345971 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.58 36.0 3.51e-01 72.7% 56.0%
2841932 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 42.0 3.72e-01 77.3% 65.9%
4980641 4041.1.1.0 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.57 48.0 3.75e-01 90.9% 84.9%
4188109 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.57 41.0 2.82e-01 77.3% 22.5%
3502994 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 50.0 4.34e-01 95.5% 66.2%
4024970 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 49.0 3.19e-01 97.7% 32.1%
4202289 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.56 44.0 3.14e-01 85.2% 45.0%
3265961 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.56 41.0 3.22e-01 83.0% 35.8%
4933430 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.55 46.0 3.68e-01 90.9% 85.1%
3844285 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.55 42.0 3.58e-01 84.1% 52.9%
3415735 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.55 47.0 4.60e-01 100.0% 87.4%
3259296 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.55 47.0 3.97e-01 94.3% 95.3%
3491456 3369.1.1.0 beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.54 48.0 4.06e-01 100.0% 64.7%
3933928 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 47.0 3.17e-01 100.0% 44.1%
3900096 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.53 45.0 3.17e-01 96.6% 51.7%
6519 265.1.1.1 a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.53 45.0 4.06e-01 94.3% 67.5%
3664957 5084.5.1.57 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28611 0.52 44.0 2.97e-01 98.9% 24.5%
4927221 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.52 47.0 3.76e-01 100.0% 72.6%
3610489 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.51 42.0 2.81e-01 95.5% 39.0%
3989853 77.1.1.13 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › CFSR 0.51 41.0 2.92e-01 93.2% 63.8%
3907200 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 42.0 2.49e-01 90.9% 23.4%