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MT770738.1__QNG62703.1__B1VFA_161__00157
Bact-VirMT770738.1__QNG62703.1__B1VFA_161__00157
Identity
- Accession:
- MT770738 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-55
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 58.0 | 4.69e-01 | 90.4% | 99.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 58.0 | 4.65e-01 | 88.5% | 100.0% |
| 3pl5A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.69 | 59.0 | 4.52e-01 | 96.2% | 94.2% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.67 | 53.0 | 3.56e-01 | 90.4% | 23.0% |
| 4jdmA02 | 6.10.250.2680 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 42.0 | 3.93e-01 | 96.2% | 52.4% |
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.67 | 53.0 | 4.19e-01 | 90.4% | 41.4% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.66 | 46.0 | 3.28e-01 | 73.1% | 40.9% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.66 | 52.0 | 4.43e-01 | 88.5% | 83.0% |
| 4p78A00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.66 | 53.0 | 4.62e-01 | 98.1% | 57.0% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 50.0 | 3.95e-01 | 98.1% | 40.5% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 55.0 | 4.34e-01 | 100.0% | 85.6% |
| 1aqcB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 51.0 | 3.89e-01 | 94.2% | 94.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 3.58e-01 | 78.8% | 89.6% |
| 2h7fX02 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.59 | 51.0 | 3.30e-01 | 96.2% | 51.0% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 4.08e-01 | 80.8% | 84.4% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.56 | 42.0 | 2.99e-01 | 80.8% | 72.8% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 4.06e-01 | 80.8% | 81.6% |
| 3bexA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 41.0 | 3.16e-01 | 84.6% | 34.6% |
| 2nutA03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 43.0 | 2.74e-01 | 84.6% | 33.5% |
| 2g7hA01 | 3.30.160.460 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 39.0 | 3.46e-01 | 75.0% | 80.3% |
| 3uxuA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.55 | 44.0 | 3.30e-01 | 98.1% | 62.3% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.55 | 46.0 | 2.76e-01 | 92.3% | 94.4% |
| 4dzoA02 | 3.30.457.60 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.54 | 45.0 | 4.05e-01 | 98.1% | 97.4% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.53 | 36.0 | 3.01e-01 | 71.2% | 45.4% |
| 3j7aY00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 3.24e-01 | 94.2% | 55.2% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 39.0 | 2.74e-01 | 90.4% | 46.9% |
| 1zo0A00 | 3.40.630.60 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.52 | 36.0 | 2.69e-01 | 71.2% | 32.5% |
| 3ne5B01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.51 | 36.0 | 3.14e-01 | 76.9% | 53.5% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 40.0 | 3.19e-01 | 86.5% | 89.9% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 37.0 | 2.77e-01 | 78.8% | 53.5% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4967355 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.78 | 67.0 | 6.18e-01 | 100.0% | 75.4% |
| 3671921 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.76 | 61.0 | 6.03e-01 | 86.5% | 83.6% |
| 4929701 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.74 | 60.0 | 5.71e-01 | 92.3% | 76.7% |
| 3945142 | 252.2.1.7 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › PF30395 | 0.73 | 59.0 | 6.03e-01 | 92.3% | 98.0% |
| 4951845 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.72 | 52.0 | 4.52e-01 | 75.0% | 100.0% |
| 5077402 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.69 | 47.0 | 3.21e-01 | 71.2% | 94.6% |
| 3321360 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.67 | 58.0 | 5.17e-01 | 98.1% | 85.3% |
| 4978622 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 54.0 | 4.50e-01 | 96.2% | 52.0% |
| 4947696 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 56.0 | 4.27e-01 | 100.0% | 40.0% |
| 3255946 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 50.0 | 4.31e-01 | 92.3% | 55.0% |
| 4020238 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.63 | 43.0 | 3.06e-01 | 71.2% | 75.3% |
| 3649429 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.63 | 53.0 | 3.77e-01 | 98.1% | 35.9% |
| 4977899 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 48.0 | 3.95e-01 | 90.4% | 44.5% |
| 3758651 | 633.23.1.34 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 | 0.62 | 53.0 | 3.53e-01 | 92.3% | 73.2% |
| 5047050 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 52.0 | 4.14e-01 | 98.1% | 46.4% |
| 5077835 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 49.0 | 3.80e-01 | 92.3% | 41.6% |
| 4200272 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.60 | 48.0 | 4.05e-01 | 90.4% | 54.4% |
| 3579362 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 49.0 | 3.87e-01 | 94.2% | 46.4% |
| 5045552 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 47.0 | 3.58e-01 | 96.2% | 35.7% |
| 4977260 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 45.0 | 3.09e-01 | 80.8% | 59.5% |
| 5073991 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 46.0 | 3.67e-01 | 96.2% | 40.0% |
| 3502373 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.58 | 40.0 | 3.29e-01 | 73.1% | 37.9% |
| 5044666 | 101.1.8.2 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Topoisom_I | 0.58 | 50.0 | 3.47e-01 | 100.0% | 30.6% |
| 3423947 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.58 | 46.0 | 2.85e-01 | 84.6% | 18.9% |
| 3741860 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.57 | 45.0 | 3.57e-01 | 98.1% | 39.2% |
| 3725907 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 41.0 | 3.86e-01 | 84.6% | 62.3% |
| 3088276 | 2485.1.1.19 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › L51_S25_CI-B8 | 0.56 | 45.0 | 3.84e-01 | 96.2% | 85.7% |
| 5054951 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.56 | 41.0 | 3.10e-01 | 78.8% | 79.2% |
| 5045210 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 43.0 | 3.48e-01 | 96.2% | 40.0% |
| 3960168 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.55 | 36.0 | 3.73e-01 | 84.6% | 74.0% |
| 1224463 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.54 | 40.0 | 4.16e-01 | 84.6% | 87.8% |
| 4949985 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.44e-01 | 90.4% | 51.2% |
| 1834407 | 3218.1.1.1 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain › Terminase_2 | 0.52 | 37.0 | 3.28e-01 | 76.9% | 55.1% |
| 5063118 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.52 | 45.0 | 2.68e-01 | 100.0% | 13.5% |
| 4453818 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 43.0 | 3.10e-01 | 92.3% | 64.7% |
| 3276749 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.52 | 41.0 | 2.80e-01 | 90.4% | 33.5% |
| 3933293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 34.0 | 3.28e-01 | 78.8% | 60.3% |
| 5057283 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.51 | 41.0 | 3.04e-01 | 86.5% | 69.6% |
| 3786120 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 35.0 | 3.62e-01 | 78.8% | 76.0% |