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MT771343.1__QOC56084.1__SEA_CLOWN_86__00086

Bact-Vir

MT771343.1__QOC56084.1__SEA_CLOWN_86__00086

Identity

Accession:
MT771343 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stackebrandtviridae› Clownvirus› Gordonia_phage_Clown

TaxID: 2759393

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-69
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 55.0 5.76e-01 100.0% 82.1%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 56.0 5.72e-01 100.0% 78.3%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 57.0 6.11e-01 100.0% 94.3%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 51.0 5.36e-01 100.0% 83.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 56.0 5.93e-01 100.0% 92.5%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 5.15e-01 100.0% 71.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 50.0 4.57e-01 100.0% 55.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 50.0 5.01e-01 100.0% 75.8%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 4.35e-01 100.0% 54.1%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.99e-01 100.0% 93.6%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.32e-01 100.0% 55.8%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 5.24e-01 100.0% 80.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 53.0 4.98e-01 100.0% 74.7%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.33e-01 100.0% 90.6%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 5.17e-01 100.0% 91.8%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.64e-01 100.0% 84.5%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 50.0 5.01e-01 100.0% 88.7%
2vxtI00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 52.0 3.97e-01 100.0% 93.6%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.37e-01 100.0% 70.8%
2kymA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 48.0 4.25e-01 100.0% 60.2%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 50.0 3.14e-01 98.4% 32.5%
4ii1A01 2.30.30.1190 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.78e-01 100.0% 88.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 46.0 4.72e-01 100.0% 93.2%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 45.0 4.68e-01 100.0% 96.4%
3v0aB04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 47.0 3.68e-01 100.0% 89.7%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 38.0 4.04e-01 100.0% 87.5%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.78e-01 100.0% 96.6%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 47.0 3.06e-01 96.7% 29.4%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.37e-01 100.0% 78.1%
2k3aA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 44.0 3.76e-01 100.0% 52.0%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.55 43.0 3.79e-01 90.2% 86.9%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 34.0 2.99e-01 85.2% 37.6%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 40.0 2.75e-01 80.3% 46.7%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.95e-01 96.7% 93.0%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 47.0 4.58e-01 100.0% 89.7%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.54 46.0 3.26e-01 100.0% 51.9%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.89e-01 100.0% 88.2%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 45.0 4.30e-01 100.0% 79.7%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 42.0 4.34e-01 90.2% 96.6%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 3.74e-01 91.8% 69.8%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 3.44e-01 95.1% 59.7%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 43.0 3.72e-01 100.0% 56.2%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 42.0 3.73e-01 91.8% 63.0%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 3.49e-01 96.7% 59.0%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 41.0 3.28e-01 96.7% 71.1%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 44.0 4.41e-01 98.4% 96.7%
4fdaA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 45.0 3.02e-01 100.0% 40.7%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.51 39.0 3.74e-01 85.2% 81.7%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.50 43.0 3.90e-01 100.0% 93.3%
3kf3A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 41.0 2.97e-01 90.2% 78.5%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 44.0 3.21e-01 96.7% 61.1%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 38.0 3.61e-01 85.2% 87.8%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3429682 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 58.0 5.44e-01 100.0% 58.7%
1263713 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.83 57.0 6.17e-01 100.0% 84.6%
3304602 4.1.1.427 ↗ beta barrels › SH3 › SH3 › SH3 › F-box 0.83 56.0 4.81e-01 100.0% 45.3%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.83 57.0 4.34e-01 100.0% 32.6%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.83 57.0 4.77e-01 100.0% 44.0%
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.82 56.0 6.05e-01 100.0% 86.0%
3315100 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 57.0 5.58e-01 100.0% 67.7%
3993250 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.82 55.0 5.81e-01 100.0% 78.2%
3389311 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 58.0 4.83e-01 100.0% 45.0%
3561707 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 56.0 4.74e-01 100.0% 44.0%
3744277 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 58.0 6.29e-01 100.0% 90.0%
3393360 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 56.0 4.53e-01 100.0% 38.3%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 56.0 5.92e-01 100.0% 80.0%
3393297 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 57.0 5.23e-01 100.0% 56.2%
3467678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 58.0 4.75e-01 100.0% 41.8%
3936430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 5.11e-01 100.0% 55.0%
3326132 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 55.0 5.40e-01 100.0% 66.2%
3662072 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 4.42e-01 100.0% 36.7%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.81 56.0 6.04e-01 100.0% 88.0%
3463181 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 5.32e-01 100.0% 62.9%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 57.0 5.36e-01 100.0% 61.3%
3612184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 55.0 5.62e-01 100.0% 73.3%
3684646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 57.0 5.24e-01 100.0% 57.5%
3465976 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 55.0 5.45e-01 100.0% 67.7%
3231263 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.80 56.0 6.14e-01 100.0% 90.0%
3503815 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 55.0 4.93e-01 100.0% 51.8%
3408556 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 55.0 4.46e-01 100.0% 40.0%
3706998 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 55.0 5.55e-01 100.0% 73.3%
3707347 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 5.70e-01 100.0% 80.0%
3622055 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 54.0 4.84e-01 100.0% 51.8%
3911241 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 54.0 4.55e-01 100.0% 44.0%
3237262 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 54.0 4.39e-01 100.0% 40.0%
3577505 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 53.0 4.74e-01 100.0% 51.8%
3256498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 54.0 5.61e-01 100.0% 81.8%
3533318 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 53.0 5.71e-01 100.0% 88.0%
3784140 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 58.0 6.04e-01 100.0% 90.9%
3774108 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 51.0 4.45e-01 100.0% 46.3%
3302817 4.1.1.362 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.74 53.0 4.37e-01 100.0% 42.2%
3626694 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 51.0 4.49e-01 100.0% 48.9%
3304627 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 52.0 5.45e-01 100.0% 83.6%
3475965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 50.0 5.59e-01 100.0% 97.8%
2106277 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.72 51.0 4.04e-01 100.0% 37.1%
4261791 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.70 49.0 3.76e-01 100.0% 31.7%
3989485 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.69 47.0 5.07e-01 100.0% 88.0%
2561577 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.67 46.0 4.65e-01 100.0% 72.1%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 46.0 5.02e-01 100.0% 90.0%
3908017 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.65 56.0 5.08e-01 100.0% 71.2%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 52.0 5.24e-01 100.0% 88.9%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 53.0 4.90e-01 100.0% 72.5%
3964422 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 45.0 3.37e-01 100.0% 29.4%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 53.0 4.84e-01 100.0% 72.5%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.13e-01 100.0% 89.2%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 3.63e-01 100.0% 29.0%
3482559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 3.93e-01 100.0% 96.5%
4931822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.40e-01 100.0% 73.8%
4953223 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 41.0 4.32e-01 100.0% 86.0%
3623785 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 51.0 4.76e-01 100.0% 77.3%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 52.0 4.90e-01 100.0% 80.0%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.66e-01 100.0% 80.0%
3787441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 49.0 4.41e-01 100.0% 64.4%
3498157 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 51.0 4.35e-01 100.0% 80.0%
3282745 1.1.12.0 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins 0.58 50.0 4.09e-01 100.0% 67.5%
3489317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 37.0 4.08e-01 85.2% 88.9%
5020252 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 43.0 3.57e-01 100.0% 44.2%
3170649 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 49.0 4.43e-01 100.0% 83.5%
3624228 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 48.0 4.55e-01 100.0% 93.3%
3812208 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 2.76e-01 98.4% 23.5%
3496961 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.73e-01 85.2% 67.7%
3977079 1.1.12.0 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins 0.55 46.0 3.87e-01 100.0% 71.3%
3926758 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 3.52e-01 100.0% 60.0%
3549597 4.1.1.77 ↗ beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.54 47.0 3.72e-01 100.0% 66.2%
5017958 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 45.0 3.53e-01 100.0% 74.0%
3555993 4.1.1.77 ↗ beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.54 44.0 3.57e-01 91.8% 55.8%
4001976 4.1.1.77 ↗ beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.54 43.0 3.69e-01 91.8% 63.8%
25850 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 40.0 3.59e-01 85.2% 66.0%
3642679 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.53 44.0 3.81e-01 100.0% 75.9%
3557698 220.1.1.122 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.52 45.0 3.88e-01 100.0% 83.0%
3909439 220.1.1.40 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › OCRL_clath_bd 0.52 43.0 3.66e-01 100.0% 76.5%
3853571 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.52 42.0 3.75e-01 95.1% 75.8%
3731231 220.1.1.214 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_C 0.52 43.0 3.64e-01 100.0% 86.1%
3940829 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.23e-01 85.2% 56.4%
3971321 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.50 37.0 3.63e-01 100.0% 73.9%