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MT776806.1__QNJ59254.1__SEA_MRMIYAGI_40__00040
Bact-VirMT776806.1__QNJ59254.1__SEA_MRMIYAGI_40__00040
Identity
- Accession:
- MT776806 ↗
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Taxonomy
TaxID: 2762395
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-89
Domain cluster:
rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00280__D51-130
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fw9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 3.09e-01 | 77.0% | 54.3% |
| 1r9fA01 | 3.30.390.180 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 | 0.56 | 46.0 | 4.27e-01 | 100.0% | 72.5% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.55 | 45.0 | 4.48e-01 | 100.0% | 84.8% |
| 1ad2A01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.55 | 47.0 | 4.25e-01 | 95.4% | 87.6% |
| 1dwuA01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.53 | 47.0 | 4.19e-01 | 97.7% | 89.3% |
| 5vawA01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.52 | 39.0 | 3.60e-01 | 80.5% | 62.9% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 47.0 | 4.32e-01 | 100.0% | 83.2% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.51 | 42.0 | 3.25e-01 | 92.0% | 95.1% |
| 3nr5A00 | 3.40.1000.50 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Repressor of RNA polymerase III transcription Maf1 | 0.51 | 37.0 | 3.09e-01 | 77.0% | 87.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.71 | 43.0 | 3.69e-01 | 75.9% | 39.3% |
| 3484879 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.59 | 35.0 | 4.12e-01 | 74.7% | 98.0% |
| 4954188 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.52 | 46.0 | 3.88e-01 | 100.0% | 57.0% |
| 5055360 | 7575.1.1.18 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › DUF6345 | 0.51 | 41.0 | 3.16e-01 | 93.1% | 70.4% |