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MT778837.1__QNH71458.1__AF3_029__00029

Bact-Vir

MT778837.1__QNH71458.1__AF3_029__00029

Identity

Accession:
MT778837 ↗
Kingdom:
phage

Quality

67.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pootjesviridae› Innesvirus› Rhizobium_phage_AF3

TaxID: 2763529

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-71
PDB
D2 high residues 82-140
PDB
Domain cluster: rep: MF403008.1__AUZ95067.1__X__00298__D48-99
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.82 64.0 5.97e-01 83.1% 73.2%
1mgpA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.75 64.0 4.99e-01 93.2% 66.9%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.74 62.0 4.84e-01 91.5% 70.5%
3nyiA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.74 63.0 4.74e-01 93.2% 70.1%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 55.0 4.34e-01 86.4% 40.9%
3cqyB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 51.0 3.60e-01 78.0% 47.3%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.68 55.0 4.07e-01 88.1% 55.0%
4hkqA04 3.10.20.370 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 49.0 4.58e-01 78.0% 86.8%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.66 51.0 4.19e-01 88.1% 45.1%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 47.0 4.48e-01 83.1% 67.1%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 50.0 4.15e-01 86.4% 84.0%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.64 50.0 3.82e-01 91.5% 51.0%
2lstA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 48.0 3.84e-01 84.7% 77.7%
2khxA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 47.0 4.29e-01 83.1% 59.5%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.63 49.0 3.85e-01 91.5% 51.4%
1dv2A02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 51.0 3.24e-01 89.8% 82.2%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 46.0 3.97e-01 84.7% 63.5%
2vgnA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.61 53.0 4.21e-01 100.0% 66.1%
2y3vD00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.61 50.0 3.83e-01 96.6% 71.4%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 47.0 3.83e-01 86.4% 77.6%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.60 45.0 4.33e-01 86.4% 70.4%
3cxgA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 46.0 3.75e-01 88.1% 74.6%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 53.0 3.24e-01 100.0% 33.6%
1dt9A02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.59 50.0 4.14e-01 100.0% 65.2%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 51.0 3.14e-01 100.0% 33.7%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 38.0 2.74e-01 96.6% 23.4%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.28e-01 91.5% 55.3%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 43.0 3.37e-01 84.7% 77.1%
4dimA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 51.0 3.45e-01 100.0% 84.1%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 45.0 2.87e-01 86.4% 31.8%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.01e-01 94.9% 67.7%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.56 46.0 3.14e-01 100.0% 25.4%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 45.0 2.93e-01 100.0% 30.4%
3hi0A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.55 45.0 3.24e-01 93.2% 77.0%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.55 48.0 2.93e-01 100.0% 37.7%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 46.0 3.03e-01 100.0% 53.2%
1hjrA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 46.0 3.45e-01 100.0% 59.5%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.54 41.0 3.17e-01 84.7% 36.7%
1jkmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 2.81e-01 100.0% 71.8%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.53 39.0 3.49e-01 83.1% 60.9%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 4.25e-01 93.2% 92.7%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.53 47.0 3.32e-01 100.0% 89.0%
8b0qA01 3.30.420.340 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain 0.53 44.0 3.25e-01 100.0% 51.1%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 41.0 3.60e-01 86.4% 61.7%
8jj7A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 41.0 2.77e-01 98.3% 83.7%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 41.0 3.06e-01 93.2% 60.1%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 46.0 2.98e-01 100.0% 59.8%
5hv6A02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 40.0 3.27e-01 91.5% 89.1%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.78e-01 100.0% 33.0%
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 45.0 2.91e-01 100.0% 48.8%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.75e-01 100.0% 30.1%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 40.0 3.48e-01 91.5% 56.7%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.77e-01 100.0% 36.3%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
7726 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.75 57.0 5.80e-01 86.4% 84.5%
3364721 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.75 58.0 3.91e-01 84.7% 27.9%
3467141 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.75 66.0 5.29e-01 96.6% 59.1%
4317535 2484.1.1.41 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.74 54.0 3.50e-01 78.0% 34.1%
3293480 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.74 63.0 6.09e-01 93.2% 96.9%
4188237 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.73 55.0 5.71e-01 84.7% 87.3%
3376912 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.73 61.0 3.61e-01 91.5% 19.3%
3327916 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.73 59.0 3.65e-01 89.8% 21.7%
4297945 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.73 55.0 5.72e-01 86.4% 89.1%
4341865 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.72 54.0 5.62e-01 86.4% 87.3%
3376135 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.72 59.0 3.51e-01 89.8% 19.5%
3357725 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 60.0 3.59e-01 91.5% 19.5%
3363185 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.72 58.0 3.66e-01 89.8% 19.7%
3679236 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.72 56.0 3.39e-01 86.4% 14.0%
3296792 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 58.0 3.59e-01 89.8% 22.8%
4944129 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.72 61.0 4.74e-01 94.9% 74.6%
5075465 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.72 57.0 5.72e-01 91.5% 86.7%
3306835 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.72 59.0 3.63e-01 91.5% 22.8%
4944466 301.13.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.71 61.0 4.74e-01 94.9% 75.2%
4020977 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 61.0 4.26e-01 100.0% 52.5%
3677504 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.71 58.0 4.57e-01 91.5% 65.6%
3440839 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.71 62.0 5.11e-01 94.9% 73.0%
3508171 3392.1.1.1 ↗ a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO 0.70 55.0 3.96e-01 86.4% 30.3%
3341926 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.70 57.0 4.64e-01 91.5% 73.0%
3831192 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.70 63.0 5.52e-01 98.3% 68.2%
3327232 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.70 56.0 3.56e-01 89.8% 26.9%
4011588 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.70 53.0 4.88e-01 81.4% 73.3%
3284714 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.70 54.0 5.33e-01 86.4% 79.4%
3457030 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.70 57.0 3.95e-01 91.5% 41.0%
3444325 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.70 57.0 4.02e-01 91.5% 45.4%
3315195 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.70 58.0 3.87e-01 93.2% 33.9%
3675008 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.69 55.0 4.03e-01 89.8% 48.8%
3460843 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.69 56.0 3.47e-01 91.5% 22.6%
3823072 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 54.0 3.20e-01 89.8% 17.0%
3336766 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.68 55.0 3.51e-01 91.5% 27.3%
3677519 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.68 56.0 3.76e-01 93.2% 35.2%
3294876 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.68 56.0 3.95e-01 94.9% 41.5%
4134161 301.13.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.67 60.0 4.57e-01 100.0% 74.1%
3313861 4325.1.1.10 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF659 0.67 51.0 5.28e-01 83.1% 100.0%
3311424 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.66 52.0 3.37e-01 89.8% 19.0%
3715021 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.65 53.0 3.68e-01 89.8% 54.6%
3348638 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 45.0 3.64e-01 76.3% 37.4%
3474293 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 56.0 4.22e-01 100.0% 64.7%
3199354 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 48.0 3.00e-01 81.4% 22.8%
4973114 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.63 47.0 4.17e-01 84.7% 52.6%
3342974 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.63 54.0 4.78e-01 100.0% 87.8%
3639482 220.1.1.211 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7612 0.62 48.0 3.75e-01 94.9% 37.1%
3426675 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.62 46.0 4.67e-01 83.1% 81.4%
3593291 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 53.0 4.05e-01 98.3% 59.3%
3615642 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.62 46.0 4.50e-01 81.4% 75.4%
3221077 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 48.0 4.34e-01 84.7% 62.5%
3443030 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 46.0 4.28e-01 84.7% 81.2%
3592742 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 53.0 4.64e-01 100.0% 64.4%
4026643 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 50.0 4.60e-01 100.0% 75.3%
3717097 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.61 49.0 2.89e-01 91.5% 56.9%
5030536 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.60 45.0 3.79e-01 100.0% 48.0%
3683663 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.59 45.0 2.86e-01 100.0% 17.5%
3615163 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 3.68e-01 93.2% 45.8%
3994778 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 45.0 3.55e-01 89.8% 42.4%
3499345 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.58 41.0 3.78e-01 88.1% 55.3%
3747707 304.53.1.0 ↗ a+b two layers › Alpha-beta plaits › DOPA dioxygenase-like › DOPA dioxygenase-like 0.57 48.0 3.38e-01 100.0% 31.8%
3248406 1133.1.1.1 ↗ beta sandwiches › Immunomodulator A46 N-terminal domain › Immunomodulator A46 N-terminal domain › Immunomodulator A46 N-terminal domain › ComC_SSD 0.57 47.0 4.07e-01 96.6% 67.0%
3783916 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 37.0 3.84e-01 96.6% 72.7%
3327575 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 49.0 4.13e-01 96.6% 70.0%
4969674 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 3.02e-01 100.0% 26.7%
3264189 2007.2.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.56 46.0 3.10e-01 91.5% 65.4%
3535970 304.44.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.56 46.0 3.24e-01 100.0% 29.4%
3750856 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.56 44.0 2.76e-01 86.4% 32.5%
4672300 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 40.0 3.46e-01 81.4% 46.7%
3605369 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 4.01e-01 100.0% 81.8%
3387410 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 43.0 3.60e-01 91.5% 66.1%
3670446 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 48.0 3.02e-01 100.0% 27.5%
3669022 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 46.0 3.96e-01 94.9% 68.4%
4140206 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 43.0 3.84e-01 86.4% 60.0%
4099166 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.54 45.0 3.70e-01 93.2% 67.3%
4268775 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 46.0 3.67e-01 96.6% 57.6%
3933827 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 40.0 2.92e-01 84.7% 27.4%
3658860 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 43.0 3.02e-01 94.9% 39.5%
3590786 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 43.0 3.60e-01 94.9% 70.9%
4081078 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.51 42.0 3.50e-01 96.6% 52.7%
4528707 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 42.0 3.49e-01 94.9% 66.4%
3964724 3675.1.1.1 ↗ a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.50 40.0 2.98e-01 100.0% 33.5%