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MT778838.1__QNH71726.1__V1VFAS_007__00007
Bact-VirMT778838.1__QNH71726.1__V1VFAS_007__00007
Identity
- Accession:
- MT778838 ↗
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-39
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.71 | 60.0 | 4.18e-01 | 100.0% | 43.4% |
| 6uioC01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 58.0 | 4.35e-01 | 100.0% | 68.0% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.69 | 57.0 | 4.21e-01 | 100.0% | 34.3% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.69 | 56.0 | 4.10e-01 | 100.0% | 33.0% |
| 2czrA01 | 3.40.1350.70 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain | 0.68 | 53.0 | 3.88e-01 | 100.0% | 31.1% |
| 4a18P00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.68 | 49.0 | 4.07e-01 | 76.3% | 48.5% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 55.0 | 3.28e-01 | 100.0% | 18.2% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.67 | 54.0 | 3.23e-01 | 100.0% | 18.3% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.67 | 49.0 | 3.72e-01 | 89.5% | 32.3% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.66 | 46.0 | 4.37e-01 | 78.9% | 64.7% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 54.0 | 3.23e-01 | 100.0% | 21.5% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.66 | 55.0 | 3.92e-01 | 97.4% | 41.3% |
| 7cr6D01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.66 | 48.0 | 3.85e-01 | 89.5% | 37.8% |
| 3k6qA02 | 3.30.160.620 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.66 | 47.0 | 3.60e-01 | 73.7% | 30.3% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.65 | 56.0 | 4.42e-01 | 100.0% | 58.5% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.65 | 53.0 | 3.30e-01 | 94.7% | 46.2% |
| 5c68A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 49.0 | 3.71e-01 | 97.4% | 31.2% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 53.0 | 3.10e-01 | 100.0% | 19.7% |
| 3wpwA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.64 | 53.0 | 3.66e-01 | 100.0% | 94.0% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 49.0 | 3.42e-01 | 89.5% | 55.0% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.64 | 42.0 | 3.43e-01 | 71.1% | 33.3% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.64 | 50.0 | 4.23e-01 | 100.0% | 50.0% |
| 1qhuA01 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.64 | 53.0 | 3.47e-01 | 100.0% | 29.5% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.63 | 52.0 | 3.78e-01 | 100.0% | 33.6% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.63 | 44.0 | 3.92e-01 | 78.9% | 48.3% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.63 | 48.0 | 2.96e-01 | 86.8% | 14.1% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.62 | 50.0 | 3.82e-01 | 100.0% | 37.3% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.62 | 51.0 | 3.89e-01 | 100.0% | 57.4% |
| 4zm3B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 49.0 | 3.47e-01 | 100.0% | 48.6% |
| 4xmqA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 44.0 | 3.12e-01 | 78.9% | 71.4% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 42.0 | 3.65e-01 | 78.9% | 43.1% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.61 | 46.0 | 3.62e-01 | 100.0% | 36.5% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.61 | 45.0 | 3.16e-01 | 100.0% | 23.6% |
| 2cjgA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 48.0 | 3.32e-01 | 100.0% | 38.3% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.60 | 49.0 | 3.57e-01 | 100.0% | 31.0% |
| 1pjzA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 45.0 | 2.91e-01 | 94.7% | 16.4% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.60 | 44.0 | 2.82e-01 | 86.8% | 15.2% |
| 6fucA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 50.0 | 3.91e-01 | 97.4% | 74.4% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 47.0 | 3.45e-01 | 97.4% | 36.8% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 49.0 | 3.48e-01 | 100.0% | 62.5% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 48.0 | 3.34e-01 | 97.4% | 26.4% |
| 1px5A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 45.0 | 3.26e-01 | 97.4% | 70.6% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.59 | 44.0 | 2.82e-01 | 86.8% | 15.7% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 3.68e-01 | 78.9% | 43.8% |
| 2p62A01 | 3.40.50.10620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains | 0.59 | 47.0 | 3.26e-01 | 94.7% | 77.0% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 51.0 | 3.72e-01 | 100.0% | 71.3% |
| 4j4hA01 | 3.40.50.12150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 3.22e-01 | 97.4% | 45.9% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.58 | 47.0 | 2.87e-01 | 100.0% | 18.3% |
| 1genA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.58 | 49.0 | 3.15e-01 | 100.0% | 84.0% |
| 4g41A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.58 | 43.0 | 2.73e-01 | 86.8% | 15.3% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 49.0 | 2.91e-01 | 100.0% | 39.0% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 45.0 | 3.55e-01 | 97.4% | 50.0% |
| 1zx8A01 | 2.40.100.20 | Mainly Beta › Beta Barrel › Cyclophilin › | 0.58 | 47.0 | 3.37e-01 | 100.0% | 56.8% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 40.0 | 2.77e-01 | 100.0% | 18.4% |
| 3qwuA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.93e-01 | 78.9% | 83.0% |
| 3h1tA01 | 3.90.1570.30 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.56 | 45.0 | 3.25e-01 | 100.0% | 67.2% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 40.0 | 3.32e-01 | 100.0% | 38.5% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.56 | 44.0 | 4.18e-01 | 97.4% | 84.3% |
| 6n59A02 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 38.0 | 3.09e-01 | 73.7% | 98.8% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 42.0 | 2.98e-01 | 97.4% | 28.3% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 39.0 | 3.49e-01 | 78.9% | 60.7% |
| 4nhxA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.55 | 42.0 | 2.68e-01 | 92.1% | 79.3% |
| 6p8uA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 43.0 | 3.05e-01 | 100.0% | 75.7% |
| 1hdhA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 40.0 | 3.37e-01 | 97.4% | 44.2% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 3.75e-01 | 100.0% | 68.3% |
| 2wmmA02 | 3.30.70.3500 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MukB, hinge domain | 0.53 | 44.0 | 3.21e-01 | 97.4% | 62.8% |
| 1gkuB05 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 2.99e-01 | 97.4% | 38.8% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.52 | 38.0 | 2.77e-01 | 84.2% | 42.9% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 37.0 | 3.50e-01 | 94.7% | 82.8% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 40.0 | 2.57e-01 | 97.4% | 37.0% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 38.0 | 3.54e-01 | 94.7% | 83.1% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.18e-01 | 100.0% | 47.9% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 38.0 | 2.67e-01 | 84.2% | 32.8% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.50 | 39.0 | 2.68e-01 | 100.0% | 85.5% |
| 2c1iA02 | 3.90.640.30 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.50 | 41.0 | 3.37e-01 | 100.0% | 59.7% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216246 | 2004.1.1.230 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like | 0.77 | 61.0 | 3.96e-01 | 97.4% | 19.4% |
| 3742860 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.74 | 49.0 | 3.30e-01 | 71.1% | 17.9% |
| 5064802 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 53.0 | 4.07e-01 | 78.9% | 43.3% |
| 4943886 | 230.1.1.0 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like | 0.71 | 56.0 | 3.65e-01 | 86.8% | 53.8% |
| 3786078 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.71 | 56.0 | 3.12e-01 | 89.5% | 9.1% |
| 3283640 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.71 | 54.0 | 3.17e-01 | 86.8% | 10.1% |
| 5001118 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.71 | 54.0 | 3.57e-01 | 89.5% | 20.0% |
| 5038830 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.70 | 52.0 | 3.86e-01 | 81.6% | 75.0% |
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.70 | 51.0 | 3.79e-01 | 81.6% | 71.4% |
| 4463837 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.70 | 52.0 | 3.86e-01 | 81.6% | 70.5% |
| 3173084 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.69 | 57.0 | 4.41e-01 | 97.4% | 42.4% |
| 3484776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 55.0 | 3.88e-01 | 89.5% | 34.2% |
| 2756142 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.69 | 51.0 | 4.58e-01 | 100.0% | 57.4% |
| 4959470 | 873.1.1.12 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 | 0.69 | 56.0 | 4.06e-01 | 97.4% | 60.8% |
| 4647064 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.69 | 52.0 | 4.50e-01 | 100.0% | 53.3% |
| 5073839 | 2008.5.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C | 0.69 | 53.0 | 3.67e-01 | 97.4% | 24.4% |
| 4930769 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 49.0 | 3.68e-01 | 100.0% | 29.5% |
| 5054531 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 51.0 | 3.85e-01 | 81.6% | 68.0% |
| 3409029 | 331.23.1.2 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C | 0.68 | 56.0 | 4.61e-01 | 97.4% | 51.4% |
| 4968405 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.66 | 48.0 | 3.58e-01 | 81.6% | 68.2% |
| 5061180 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.66 | 50.0 | 3.78e-01 | 84.2% | 75.8% |
| 4937815 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 51.0 | 4.12e-01 | 100.0% | 41.2% |
| 3550365 | 331.23.1.2 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C | 0.65 | 52.0 | 4.38e-01 | 100.0% | 50.0% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 50.0 | 4.64e-01 | 86.8% | 66.0% |
| 3928962 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.65 | 54.0 | 3.71e-01 | 100.0% | 32.0% |
| 3199325 | 241.1.1.11 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Med14 | 0.65 | 56.0 | 3.60e-01 | 100.0% | 23.9% |
| 3919221 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.65 | 46.0 | 3.80e-01 | 78.9% | 52.0% |
| 4042893 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.65 | 49.0 | 3.89e-01 | 100.0% | 38.8% |
| 4864637 | 7008.1.1.1 ↗ | alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.65 | 52.0 | 3.71e-01 | 100.0% | 49.6% |
| 3178364 | 319.1.1.19 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 | 0.64 | 48.0 | 3.62e-01 | 86.8% | 55.2% |
| 3627280 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.64 | 50.0 | 4.26e-01 | 97.4% | 49.3% |
| 4336238 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.64 | 49.0 | 3.81e-01 | 100.0% | 35.0% |
| 3221103 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 51.0 | 3.79e-01 | 94.7% | 38.1% |
| 3260335 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.63 | 50.0 | 2.95e-01 | 100.0% | 18.1% |
| 5015133 | 4100.1.1.9 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 | 0.63 | 44.0 | 3.84e-01 | 76.3% | 46.7% |
| 4058368 | 2003.1.5.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT | 0.62 | 45.0 | 2.91e-01 | 86.8% | 14.9% |
| 3588583 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.62 | 48.0 | 3.45e-01 | 100.0% | 37.9% |
| 3956394 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.62 | 44.0 | 2.75e-01 | 78.9% | 12.5% |
| 3319016 | 2007.5.1.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase | 0.62 | 44.0 | 2.76e-01 | 78.9% | 13.7% |
| 3606317 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 42.0 | 4.13e-01 | 76.3% | 64.4% |
| 4952060 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 51.0 | 4.51e-01 | 100.0% | 81.7% |
| 5038175 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.61 | 44.0 | 3.64e-01 | 100.0% | 40.0% |
| 3656431 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.61 | 40.0 | 2.25e-01 | 73.7% | 5.4% |
| 3623599 | 377.1.1.83 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 | 0.61 | 42.0 | 4.29e-01 | 76.3% | 97.1% |
| 3819668 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.60 | 46.0 | 4.44e-01 | 86.8% | 79.5% |
| 4997764 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.60 | 41.0 | 4.21e-01 | 71.1% | 93.3% |
| 5012231 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.60 | 44.0 | 3.56e-01 | 81.6% | 46.3% |
| 4660203 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.60 | 48.0 | 3.44e-01 | 97.4% | 28.0% |
| 3935356 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.60 | 46.0 | 3.49e-01 | 100.0% | 43.3% |
| 4926837 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 46.0 | 4.04e-01 | 84.2% | 53.3% |
| 4930870 | 2007.1.1.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › PylD_N | 0.59 | 46.0 | 3.44e-01 | 100.0% | 46.7% |
| 4959480 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.59 | 40.0 | 3.58e-01 | 73.7% | 45.0% |
| 5013439 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 46.0 | 3.48e-01 | 89.5% | 36.0% |
| 3365178 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 46.0 | 4.11e-01 | 100.0% | 58.5% |
| 3185844 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 43.0 | 3.64e-01 | 81.6% | 44.3% |
| 3438045 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.58 | 45.0 | 4.05e-01 | 100.0% | 58.5% |
| 3882796 | 1021.1.1.2 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD | 0.58 | 39.0 | 3.10e-01 | 71.1% | 30.6% |
| 4011287 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 39.0 | 3.37e-01 | 73.7% | 42.9% |
| 4948719 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.58 | 46.0 | 3.58e-01 | 100.0% | 76.0% |
| 5058682 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.58 | 48.0 | 3.08e-01 | 100.0% | 78.2% |
| 5079015 | 2484.1.1.71 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter | 0.58 | 49.0 | 3.04e-01 | 100.0% | 15.9% |
| 4069542 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.57 | 44.0 | 3.01e-01 | 100.0% | 93.1% |
| 3400449 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 42.0 | 2.79e-01 | 78.9% | 17.1% |
| 3260247 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.57 | 45.0 | 3.70e-01 | 100.0% | 60.2% |
| 4017381 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.57 | 42.0 | 3.37e-01 | 100.0% | 61.9% |
| 3483955 | 386.1.1.6 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 | 0.57 | 39.0 | 3.09e-01 | 71.1% | 34.1% |
| 3743011 | 63.1.1.4 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH_1 | 0.57 | 46.0 | 3.41e-01 | 100.0% | 51.3% |
| 3580045 | 375.1.1.217 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 | 0.57 | 42.0 | 4.33e-01 | 86.8% | 100.0% |
| 4991612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 45.0 | 3.86e-01 | 97.4% | 52.9% |
| 4927544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 41.0 | 4.23e-01 | 86.8% | 100.0% |
| 3296731 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.56 | 39.0 | 3.81e-01 | 89.5% | 66.7% |
| 3926232 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.56 | 46.0 | 3.13e-01 | 100.0% | 25.3% |
| 3482645 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.55 | 44.0 | 4.53e-01 | 94.7% | 100.0% |
| 3289616 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.55 | 44.0 | 2.56e-01 | 97.4% | 9.1% |
| 3622446 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.55 | 43.0 | 3.75e-01 | 100.0% | 58.6% |
| 3914736 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.54 | 44.0 | 3.84e-01 | 100.0% | 64.6% |
| 4981101 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.54 | 41.0 | 3.01e-01 | 97.4% | 43.0% |
| None | — | 0.53 | 41.0 | 2.55e-01 | 100.0% | 12.1% | |
| 4366164 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.53 | 38.0 | 2.33e-01 | 100.0% | 9.2% |
| 3854772 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.53 | 44.0 | 3.47e-01 | 97.4% | 66.7% |
| 3288945 | 241.9.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 | 0.52 | 37.0 | 3.01e-01 | 94.7% | 64.8% |
| 5031337 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.52 | 37.0 | 3.75e-01 | 100.0% | 92.3% |
| 3785729 | 59.1.1.5 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 | 0.52 | 43.0 | 3.32e-01 | 97.4% | 41.1% |
| 5068097 | 2484.1.1.71 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter | 0.52 | 35.0 | 2.05e-01 | 81.6% | 6.5% |
| 3708118 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.52 | 46.0 | 2.66e-01 | 100.0% | 10.9% |
D2
medium
residues 43-71
Domain cluster:
representative