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MT806187.1__QNO13211.1__BacuniF2_00040__00003

Bact-Vir

MT806187.1__QNO13211.1__BacuniF2_00040__00003

Identity

Accession:
MT806187 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacteroides_phage_F2

TaxID: 2762303

Cluster

View cluster (241 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-148
PDB
Domain cluster: rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06199.18 best Phage_tail_2 40.0 5.50e-10 96.4% 96.2%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.71 44.0 4.64e-01 91.3% 68.8%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 61.0 6.16e-01 97.1% 94.9%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.68 45.0 5.30e-01 90.6% 97.9%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 48.0 5.46e-01 97.8% 98.1%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.67 34.0 4.15e-01 81.9% 75.3%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 34.0 4.17e-01 80.4% 79.5%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 31.0 4.00e-01 78.3% 79.7%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 59.0 5.59e-01 100.0% 88.1%
2x7fC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 36.0 4.24e-01 92.0% 83.0%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.60 48.0 4.76e-01 94.9% 78.4%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 35.0 4.21e-01 97.1% 88.5%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 34.0 3.84e-01 83.3% 71.3%
3w7bA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 32.0 3.92e-01 80.4% 80.7%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.59 52.0 4.99e-01 93.5% 89.1%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 36.0 4.27e-01 95.7% 91.3%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 49.0 4.86e-01 100.0% 85.0%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 26.0 3.18e-01 76.1% 64.8%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 52.0 4.77e-01 100.0% 84.9%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.54 44.0 4.20e-01 97.1% 72.3%
2ausC02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.53 33.0 3.01e-01 82.6% 43.8%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.52 31.0 3.89e-01 93.5% 95.3%
1tz0B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 27.0 3.19e-01 81.9% 71.1%
3o4oC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 33.0 3.63e-01 90.6% 80.9%
2bc4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.80e-01 89.9% 86.2%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.50 43.0 4.35e-01 97.1% 93.4%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 38.0 3.99e-01 92.0% 85.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2642579 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.87 78.0 8.01e-01 99.3% 97.7%
4157825 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.87 78.0 8.09e-01 100.0% 100.0%
2674670 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.80 74.0 6.79e-01 97.8% 77.9%
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.80 66.0 5.21e-01 97.8% 44.4%
5082881 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 69.0 7.23e-01 94.9% 100.0%
2595159 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.79 74.0 6.93e-01 98.6% 82.5%
4888726 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.78 72.0 6.75e-01 97.8% 84.1%
3969448 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 57.0 6.50e-01 87.0% 100.0%
4929587 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 49.0 6.05e-01 89.1% 100.0%
4873215 1.1.13.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.76 68.0 6.82e-01 100.0% 93.6%
5062396 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 61.0 6.08e-01 88.4% 98.6%
4988100 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 62.0 6.49e-01 97.1% 100.0%
3502370 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.72 66.0 6.32e-01 100.0% 93.1%
3822278 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 36.0 4.53e-01 87.7% 78.8%
4393593 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.71 48.0 5.67e-01 93.5% 100.0%
3660837 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 36.0 4.47e-01 87.0% 80.0%
3980535 1.1.13.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.69 62.0 6.27e-01 94.9% 97.8%
4319057 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.69 48.0 5.23e-01 98.6% 85.2%
5083300 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.68 64.0 6.31e-01 100.0% 97.9%
3943681 1.1.13.47 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.68 59.0 5.80e-01 93.5% 98.7%
3967003 1.1.13.35 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11 0.68 63.0 6.34e-01 100.0% 97.1%
2387782 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.68 62.0 5.81e-01 100.0% 88.7%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.67 59.0 5.69e-01 97.1% 84.0%
3511358 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 46.0 5.29e-01 88.4% 96.0%
4094235 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 48.0 5.02e-01 100.0% 82.4%
4247994 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.65 46.0 5.33e-01 89.9% 100.0%
4036849 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.65 49.0 5.02e-01 100.0% 81.2%
4888819 1.1.13.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 0.64 48.0 5.31e-01 92.8% 96.4%
3943689 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 43.0 4.79e-01 89.9% 88.2%
3913172 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.62 41.0 3.51e-01 100.0% 40.4%
5039693 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.62 32.0 3.88e-01 83.3% 75.3%
3586477 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.62 55.0 5.03e-01 93.5% 98.9%
4538400 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.62 47.0 4.84e-01 100.0% 83.8%
3944430 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 41.0 4.64e-01 89.9% 90.5%
3602499 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.60 51.0 5.32e-01 100.0% 96.2%
4964155 1.1.9.31 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA 0.59 45.0 4.57e-01 91.3% 78.6%
4096792 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.57 53.0 4.60e-01 100.0% 77.1%
3259730 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 41.0 4.52e-01 96.4% 91.8%
3165990 310.3.1.22 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF27480, PF30181 0.55 42.0 4.61e-01 93.5% 95.7%
4988254 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.55 49.0 4.51e-01 100.0% 75.0%
4992907 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.55 48.0 4.67e-01 100.0% 85.2%
3321868 1.1.9.4 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.54 49.0 4.08e-01 97.1% 59.6%
4002415 389.2.1.3 ↗ few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL_2 0.54 26.0 3.64e-01 80.4% 95.4%
3451490 1.1.9.4 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.52 47.0 4.04e-01 97.1% 66.5%
1320672 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 46.0 3.68e-01 94.9% 78.3%
4444321 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.51 45.0 3.89e-01 94.9% 79.5%
4557453 304.102.1.9 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N, DKCLD, TruB_C_2, Pus10_C 0.51 37.0 3.09e-01 73.9% 62.4%
4943359 304.102.1.13 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 0.51 38.0 3.23e-01 78.3% 71.1%
5454 304.124.1.2 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 0.50 43.0 4.37e-01 97.1% 94.8%
3990367 389.4.1.7 ↗ few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.50 28.0 3.49e-01 83.3% 91.3%
5027270 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.50 46.0 4.24e-01 100.0% 78.9%
4933784 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.50 39.0 3.38e-01 83.3% 62.3%
4275176 304.102.1.5 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 0.50 38.0 3.23e-01 79.0% 71.3%