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MT818422.1__QOC58874.1__SEA_PERIODT_50__00050
Bact-VirMT818422.1__QOC58874.1__SEA_PERIODT_50__00050
Identity
- Accession:
- MT818422 ↗
- Kingdom:
- phage
Quality
58.8
mean pLDDT
Taxonomy
TaxID: 2772031
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-105
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.73 | 45.0 | 4.24e-01 | 100.0% | 53.5% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.70 | 40.0 | 2.81e-01 | 98.6% | 19.7% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.64 | 46.0 | 3.96e-01 | 97.3% | 47.1% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.61 | 42.0 | 3.55e-01 | 84.9% | 41.4% |
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 38.0 | 3.52e-01 | 84.9% | 51.6% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 49.0 | 4.04e-01 | 93.2% | 83.3% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 4.00e-01 | 94.5% | 82.1% |
| 2m89A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 3.98e-01 | 94.5% | 86.6% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 46.0 | 3.20e-01 | 91.8% | 59.6% |
| 1nrjA00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 47.0 | 3.75e-01 | 93.2% | 79.6% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 3.93e-01 | 94.5% | 85.8% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.55 | 47.0 | 3.49e-01 | 100.0% | 76.7% |
| 2qu8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.21e-01 | 87.7% | 32.5% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.55 | 39.0 | 3.88e-01 | 89.0% | 73.1% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 33.0 | 3.54e-01 | 82.2% | 72.9% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.54 | 43.0 | 3.47e-01 | 94.5% | 43.3% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 42.0 | 3.57e-01 | 84.9% | 85.1% |
| 3nwnA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 43.0 | 2.93e-01 | 93.2% | 39.0% |
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 41.0 | 3.06e-01 | 82.2% | 67.2% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.42e-01 | 86.3% | 58.4% |
| 1xm7A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 38.0 | 2.91e-01 | 78.1% | 34.4% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 44.0 | 3.82e-01 | 94.5% | 94.9% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 46.0 | 3.59e-01 | 100.0% | 92.0% |
| 4zgfA00 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 40.0 | 3.29e-01 | 84.9% | 78.0% |
| 2p84A01 | 2.60.430.10 | Mainly Beta › Sandwich › YopX-like fold › YopX-like domain | 0.52 | 37.0 | 3.96e-01 | 79.5% | 93.3% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 40.0 | 3.65e-01 | 87.7% | 76.5% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 41.0 | 3.78e-01 | 89.0% | 70.8% |
| 2jeuA02 | 2.170.200.10 | Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain | 0.51 | 36.0 | 3.28e-01 | 74.0% | 81.2% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.51 | 44.0 | 3.47e-01 | 100.0% | 94.5% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.51 | 37.0 | 2.64e-01 | 78.1% | 26.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997639 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 46.0 | 3.99e-01 | 75.3% | 42.9% |
| 4224431 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.73 | 45.0 | 3.65e-01 | 100.0% | 35.4% |
| 5075835 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.64 | 45.0 | 3.61e-01 | 100.0% | 40.8% |
| 3667278 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.63 | 46.0 | 3.83e-01 | 83.6% | 43.8% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.62 | 52.0 | 5.14e-01 | 100.0% | 86.1% |
| 4565829 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.58 | 53.0 | 3.93e-01 | 100.0% | 90.0% |
| 3393085 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.06e-01 | 91.8% | 72.0% |
| 3844858 | 220.1.1.39 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZFYVE21_C | 0.55 | 50.0 | 3.90e-01 | 100.0% | 86.4% |
| 4120496 | 377.1.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S26e | 0.55 | 30.0 | 2.98e-01 | 89.0% | 48.0% |
| 3838659 | 5085.1.1.0 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.55 | 47.0 | 2.87e-01 | 100.0% | 16.8% |
| 3497120 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 38.0 | 3.51e-01 | 86.3% | 55.8% |
| 3959634 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 46.0 | 4.10e-01 | 100.0% | 96.5% |
| 3261865 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 38.0 | 2.81e-01 | 72.6% | 70.0% |
| 4816887 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.54 | 42.0 | 3.38e-01 | 98.6% | 44.1% |
| 3396305 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.54 | 30.0 | 3.32e-01 | 83.6% | 66.1% |
| 4982249 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 43.0 | 4.03e-01 | 93.2% | 88.4% |
| 4987228 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 47.0 | 3.60e-01 | 100.0% | 69.8% |
| 4475754 | 4076.2.1.5 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MRNIP | 0.53 | 44.0 | 4.63e-01 | 91.8% | 100.0% |
| 3299024 | 223.1.1.28 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N | 0.52 | 46.0 | 3.51e-01 | 100.0% | 96.0% |
| 3282063 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 45.0 | 3.83e-01 | 100.0% | 99.2% |
| 4102441 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.52 | 40.0 | 3.09e-01 | 97.3% | 38.1% |
| 4936825 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 26.0 | 2.98e-01 | 93.2% | 60.0% |
| 2277 | 4112.1.1.1 ↗ | beta duplicates or obligate multimers › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX | 0.52 | 37.0 | 3.72e-01 | 79.5% | 76.7% |
| 4182376 | 323.1.1.25 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › SIDD_N | 0.51 | 39.0 | 3.11e-01 | 94.5% | 37.6% |
| 4279367 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 39.0 | 3.80e-01 | 95.9% | 76.2% |