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MT818426.1__QOC59332.1__SEA_LIFES_6__00006

Bact-Vir

MT818426.1__QOC59332.1__SEA_LIFES_6__00006

Identity

Accession:
MT818426 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microbacterium_phage_Lifes

TaxID: 2772025

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-96
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jbeB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.60 46.0 3.37e-01 84.6% 95.2%
8h6rA01 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.57 39.0 4.02e-01 76.9% 75.3%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 49.0 3.66e-01 98.9% 74.0%
4iu9B01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.56 42.0 3.26e-01 82.4% 38.4%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 37.0 4.06e-01 70.3% 89.0%
2dwkA00 1.20.58.900 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain 0.54 41.0 3.44e-01 81.3% 89.4%
1st6A04 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 41.0 3.82e-01 83.5% 80.3%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 39.0 4.05e-01 78.0% 90.7%
1x0tA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.53 32.0 3.84e-01 81.3% 91.8%
2d2sA02 1.20.58.1220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain 0.52 37.0 3.64e-01 74.7% 82.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027747 4982.1.1.0 ↗ alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain 0.63 50.0 4.61e-01 85.7% 78.3%
3714029 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 44.0 3.39e-01 72.5% 97.4%
1726573 601.18.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › PsbQ 0.61 46.0 4.38e-01 81.3% 66.7%
3977165 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.61 48.0 3.71e-01 85.7% 41.8%
4597094 4946.1.1.1 ↗ alpha bundles › helical domain in YacF-like proteins › helical domain in YacF-like proteins › helical domain in YacF-like proteins › ZapD 0.58 43.0 3.52e-01 78.0% 87.6%
3506950 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.57 44.0 4.45e-01 82.4% 90.0%
3598510 109.4.1.170 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N 0.56 48.0 3.47e-01 100.0% 64.3%
3244309 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.56 47.0 3.61e-01 100.0% 77.6%
3871435 109.4.1.2071 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N, HEAT_GCN1 0.55 47.0 2.75e-01 97.8% 18.6%
3560818 109.4.1.1497 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, CLASP_N, XMAP215_CLASP_TOG 0.55 47.0 2.99e-01 97.8% 33.2%
3262359 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.55 48.0 3.77e-01 97.8% 56.0%
4471016 109.4.1.2251 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, CLASP_N, HEAT_GCN1 0.55 47.0 2.67e-01 97.8% 14.7%
5040761 4095.1.1.0 ↗ alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain 0.55 31.0 3.34e-01 78.0% 62.5%
3404638 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.55 41.0 4.05e-01 81.3% 83.0%
3414688 109.4.1.170 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N 0.54 47.0 2.70e-01 97.8% 18.8%
5040955 5058.1.1.2 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.54 44.0 4.18e-01 92.3% 75.2%
3225449 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.54 36.0 3.92e-01 80.2% 84.0%
5004570 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.54 40.0 4.40e-01 81.3% 97.3%
3215887 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.52 30.0 3.27e-01 82.4% 68.0%
3425962 603.1.1.116 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27980 0.52 39.0 4.06e-01 81.3% 94.1%
3578466 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 38.0 4.03e-01 82.4% 88.7%