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MT822286.1__QOC57750.1__pEp_SNUABM10_00046__00046

Bact-Vir

MT822286.1__QOC57750.1__pEp_SNUABM10_00046__00046

Identity

Accession:
MT822286 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Erwinia_phage_pEp_SNUABM_10

TaxID: 2772017

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: rep: MW671054.1__QTH79774.1__X__00033__D2-50
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x67A01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.65 45.0 3.49e-01 83.1% 33.1%
5mw8A01 3.30.200.110 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe 0.64 49.0 3.92e-01 83.1% 92.1%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.63 47.0 3.93e-01 79.7% 46.1%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 54.0 3.25e-01 94.9% 21.3%
2ebmA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.61 45.0 3.53e-01 79.7% 40.6%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 49.0 2.94e-01 91.5% 31.1%
3kreA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 46.0 3.87e-01 81.4% 81.4%
4kcaA03 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.61 41.0 3.60e-01 79.7% 44.3%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.59 33.0 2.99e-01 72.9% 38.6%
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 36.0 4.27e-01 74.6% 94.9%
2gqrA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 44.0 3.67e-01 81.4% 79.0%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.24e-01 76.3% 51.6%
2hv2A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 43.0 3.70e-01 79.7% 81.1%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.58 46.0 3.78e-01 88.1% 56.9%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.57 50.0 3.84e-01 100.0% 85.7%
4e0aA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 42.0 3.14e-01 79.7% 59.6%
1f20A02 1.20.990.10 Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 0.57 47.0 3.50e-01 93.2% 95.6%
2v5oA03 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.56 43.0 3.34e-01 84.7% 94.2%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 40.0 3.01e-01 74.6% 65.0%
2yfsA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 49.0 2.89e-01 100.0% 21.7%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.56 45.0 3.75e-01 91.5% 94.5%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.55 48.0 3.48e-01 100.0% 56.5%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.55 40.0 2.94e-01 91.5% 28.4%
5dstA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.55 40.0 2.84e-01 78.0% 60.5%
1vwxB03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.55 42.0 3.47e-01 89.8% 95.9%
3we5A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 44.0 3.54e-01 100.0% 60.3%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 35.0 3.40e-01 71.2% 60.0%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.41e-01 91.5% 92.0%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 3.16e-01 76.3% 78.0%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 40.0 3.56e-01 91.5% 55.6%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.53 40.0 4.05e-01 81.4% 88.1%
4lgvD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 36.0 2.40e-01 72.9% 60.4%
3u2sC00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 36.0 3.23e-01 74.6% 81.1%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 35.0 2.70e-01 76.3% 29.7%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 42.0 3.41e-01 91.5% 73.5%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 43.0 3.74e-01 98.3% 90.0%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 43.0 3.93e-01 94.9% 73.8%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.51 38.0 3.85e-01 79.7% 85.0%
7w3rB01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 45.0 2.82e-01 100.0% 76.8%
1epwA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 42.0 3.09e-01 100.0% 35.1%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 40.0 3.56e-01 91.5% 58.2%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 2.93e-01 86.4% 65.2%
3rhtA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.50 40.0 2.73e-01 91.5% 38.1%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3217156 243.1.1.46 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382 0.70 52.0 3.95e-01 79.7% 41.4%
3550768 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.65 54.0 3.00e-01 93.2% 8.9%
None — 0.65 54.0 3.00e-01 93.2% 9.0%
3614505 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 56.0 3.32e-01 98.3% 18.0%
3742310 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.63 57.0 3.57e-01 100.0% 26.6%
3611566 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 53.0 3.16e-01 93.2% 20.6%
3421524 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.24e-01 96.6% 24.0%
3514909 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 53.0 3.46e-01 100.0% 28.3%
3712993 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 52.0 4.79e-01 93.2% 92.0%
3929718 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.61 54.0 3.20e-01 98.3% 18.4%
3728191 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 53.0 3.84e-01 100.0% 75.3%
3609391 206.1.3.12 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL 0.61 43.0 2.65e-01 74.6% 40.3%
5049138 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 49.0 3.82e-01 91.5% 41.5%
3253518 5.1.4.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 0.61 49.0 3.08e-01 93.2% 34.0%
3774553 223.2.1.22 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.61 52.0 3.46e-01 100.0% 31.2%
3498392 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.08e-01 94.9% 73.9%
3598679 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.60 50.0 3.46e-01 91.5% 44.3%
3579622 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 42.0 3.43e-01 79.7% 40.0%
3395485 5.1.4.155 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 0.59 51.0 3.13e-01 98.3% 24.8%
3705932 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.12e-01 96.6% 31.2%
3793525 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.59 43.0 3.51e-01 79.7% 92.2%
4003909 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.58 43.0 3.05e-01 78.0% 42.9%
3612689 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 47.0 3.90e-01 91.5% 52.7%
5029914 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.58 46.0 4.79e-01 89.8% 96.4%
3752179 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.58 52.0 4.00e-01 100.0% 72.3%
3614143 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.58 48.0 3.91e-01 96.6% 46.8%
3683559 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.58 47.0 3.29e-01 96.6% 79.5%
3842596 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.07e-01 100.0% 27.6%
3782606 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.57 42.0 3.22e-01 81.4% 86.9%
4625119 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.56 39.0 3.41e-01 71.2% 86.5%
3713176 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.56 48.0 2.96e-01 100.0% 29.2%
3608102 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 47.0 4.48e-01 94.9% 94.3%
3831707 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 50.0 3.07e-01 100.0% 85.6%
3660020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 40.0 3.81e-01 78.0% 63.0%
5065450 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 48.0 3.59e-01 100.0% 42.6%
3929989 330.16.1.2 ↗ a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › KAP 0.55 44.0 3.97e-01 91.5% 74.1%
3827309 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.55 44.0 3.90e-01 91.5% 82.2%
3938884 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 40.0 3.36e-01 79.7% 94.3%
3923688 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.54 48.0 2.89e-01 100.0% 16.2%
1665018 298.1.1.6 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C 0.54 37.0 2.42e-01 72.9% 55.4%
3265334 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.54 44.0 3.73e-01 98.3% 75.5%
3365246 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.54 39.0 2.91e-01 79.7% 32.9%
4947561 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 38.0 2.99e-01 79.7% 52.7%
4946325 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 35.0 2.92e-01 78.0% 37.1%
5079481 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 35.0 2.48e-01 71.2% 22.3%
3393619 284.4.1.2 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › PF28923 0.53 37.0 3.94e-01 79.7% 88.0%
4990857 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.52 44.0 2.90e-01 100.0% 84.4%
3188394 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.52 43.0 3.54e-01 98.3% 70.0%
4990259 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.52 40.0 3.17e-01 86.4% 63.1%
3574382 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 2.74e-01 79.7% 55.4%
3782947 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 41.0 3.38e-01 93.2% 48.3%
4600806 2.1.1.4 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.50 38.0 3.19e-01 84.7% 64.5%