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MT843275.1__QNO00959.1__phiBZS1_p65__00065

Bact-Vir

MT843275.1__QNO00959.1__phiBZS1_p65__00065

Identity

Accession:
MT843275 ↗
Kingdom:
phage

Quality

76.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Serratia_phage_vB_SspM_BZS1

TaxID: 2769334

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-134
PDB
Domain cluster: rep: CAKLQF020000003.1__CAH1076601.1__SAMEA5780031_00862__00189__D2-38_50-103
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l8yA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.81 60.0 6.25e-01 92.0% 81.9%
3qkbA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.77 60.0 6.62e-01 92.0% 97.9%
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.74 41.0 5.18e-01 78.8% 91.2%
1vr4E00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.73 57.0 6.28e-01 87.6% 98.9%
4fprB00 3.30.70.2910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 42.0 4.09e-01 77.9% 60.9%
7zqiA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 31.0 3.48e-01 76.1% 66.3%
3ue2A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 31.0 3.50e-01 75.2% 69.3%
2gysA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 31.0 3.32e-01 77.0% 64.2%
5b08A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 32.0 3.40e-01 76.1% 64.0%
1es0A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 30.0 3.18e-01 77.0% 58.6%
4gafB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.42e-01 100.0% 65.5%
2ftrA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 31.0 3.30e-01 76.1% 65.0%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.52 28.0 3.24e-01 76.1% 73.4%
2bzgA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.98e-01 100.0% 37.1%
1rjjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 31.0 3.17e-01 77.0% 59.5%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 29.0 2.93e-01 78.8% 53.6%
1tr0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 32.0 3.31e-01 78.8% 66.0%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 30.0 3.18e-01 97.3% 64.4%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
416478 872.3.1.3 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › RcsF 0.81 60.0 6.25e-01 92.0% 81.9%
3602395 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.77 56.0 6.32e-01 92.0% 94.4%
3588078 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.77 59.0 6.63e-01 92.0% 100.0%
5017604 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.76 57.0 6.34e-01 87.6% 96.7%
180088 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.76 58.0 6.45e-01 87.6% 97.8%
4027295 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.74 55.0 6.16e-01 91.2% 96.7%
3247697 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.73 54.0 6.01e-01 87.6% 95.6%
3581051 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.73 54.0 6.08e-01 88.5% 96.7%
3482573 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.71 53.0 5.88e-01 87.6% 96.7%
3513756 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.71 55.0 6.03e-01 87.6% 96.8%
3602546 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.71 59.0 6.14e-01 92.0% 95.1%
4215969 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.71 62.0 6.21e-01 92.0% 95.6%
3594297 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.70 54.0 5.87e-01 88.5% 94.7%
4462302 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.70 59.0 6.06e-01 88.5% 95.5%
4330176 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.70 59.0 6.07e-01 87.6% 98.1%
4027296 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.70 56.0 5.80e-01 89.4% 89.5%
3482574 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.70 55.0 5.57e-01 89.4% 82.5%
4011238 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.69 59.0 6.18e-01 89.4% 98.1%
4579090 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.69 59.0 5.89e-01 89.4% 90.4%
4057787 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.69 57.0 5.91e-01 85.8% 99.0%
4180995 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.69 59.0 6.05e-01 91.2% 96.4%
4952750 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.68 58.0 6.08e-01 90.3% 97.1%
4030627 872.3.1.7 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.68 53.0 5.80e-01 89.4% 98.9%
5010925 304.45.1.1 ↗ a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK 0.68 37.0 3.23e-01 77.0% 35.8%
4030626 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.67 57.0 5.83e-01 90.3% 98.2%
3492450 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.67 57.0 5.88e-01 90.3% 96.3%
3230024 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.67 59.0 3.94e-01 92.9% 64.4%
3482572 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.67 57.0 5.93e-01 90.3% 98.1%
3627284 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.66 55.0 5.69e-01 86.7% 96.2%
3959344 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.66 53.0 5.27e-01 83.2% 86.1%
3919160 872.3.1.8 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3, YbjQ_4 0.66 53.0 4.25e-01 86.7% 46.3%
3510623 872.3.1.7 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.65 54.0 5.15e-01 88.5% 76.0%
3270041 872.3.1.7 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.65 56.0 5.78e-01 95.6% 97.1%
3492448 872.3.1.7 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.65 53.0 5.64e-01 88.5% 97.0%
3709183 872.3.1.7 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.65 54.0 5.48e-01 89.4% 89.1%
3496203 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.65 52.0 5.55e-01 87.6% 96.0%
3955529 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.64 51.0 5.48e-01 83.2% 94.0%
3766225 872.3.1.5 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.64 52.0 5.32e-01 85.8% 98.2%
5082575 304.109.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.63 37.0 4.21e-01 77.0% 80.0%
1731578 304.4.1.14 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb 0.54 33.0 3.47e-01 77.9% 66.3%
4196274 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.53 33.0 3.32e-01 77.9% 60.0%
3332951 206.1.1.72 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.52 39.0 2.78e-01 79.6% 37.3%
3163591 304.13.1.1 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.52 37.0 3.61e-01 100.0% 67.5%
4986259 2003.1.5.55 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.51 32.0 2.69e-01 100.0% 36.2%
5048705 2012.1.1.1 ↗ a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like › Memo 0.51 44.0 3.36e-01 99.1% 70.4%
4000828 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.51 44.0 3.67e-01 97.3% 68.8%