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MT855965.1__QNL13347.1__X__00009
Bact-VirMT855965.1__QNL13347.1__X__00009
Identity
- Accession:
- MT855965 ↗
- Kingdom:
- phage
Quality
94.6
mean pLDDT
Taxonomy
TaxID: 2762278
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-211
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.71 | 32.0 | 4.76e-01 | 82.6% | 97.8% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.68 | 49.0 | 4.65e-01 | 73.4% | 96.7% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.67 | 38.0 | 5.08e-01 | 79.7% | 100.0% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.61 | 37.0 | 4.57e-01 | 84.1% | 99.2% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.60 | 34.0 | 4.19e-01 | 93.7% | 86.5% |
| 4gnkE00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.60 | 46.0 | 4.43e-01 | 79.7% | 100.0% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 43.0 | 4.16e-01 | 75.8% | 79.7% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.58 | 37.0 | 4.45e-01 | 96.6% | 95.6% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.58 | 35.0 | 4.26e-01 | 96.6% | 93.2% |
| 8hk0C01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 29.0 | 3.41e-01 | 74.9% | 67.3% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.56 | 35.0 | 3.81e-01 | 89.4% | 71.9% |
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 31.0 | 3.31e-01 | 90.3% | 61.5% |
| 2ix5A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 29.0 | 3.25e-01 | 75.4% | 63.9% |
| 2d1lA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 40.0 | 3.82e-01 | 76.3% | 79.5% |
| 2d2sA02 | 1.20.58.1220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain | 0.54 | 27.0 | 3.89e-01 | 89.4% | 100.0% |
| 2jifA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 28.0 | 3.24e-01 | 75.4% | 64.3% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 35.0 | 2.99e-01 | 85.5% | 38.7% |
| 5mawD00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.52 | 44.0 | 4.13e-01 | 100.0% | 71.9% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 31.0 | 3.88e-01 | 71.0% | 100.0% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.52 | 42.0 | 3.61e-01 | 84.1% | 80.4% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.51 | 36.0 | 4.02e-01 | 91.8% | 92.4% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4581508 | 601.19.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein | 0.71 | 58.0 | 5.78e-01 | 99.5% | 82.9% |
| 3839022 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.71 | 56.0 | 5.70e-01 | 96.6% | 83.4% |
| 3206361 | 6108.1.1.0 ↗ | alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins | 0.71 | 55.0 | 5.65e-01 | 98.6% | 84.1% |
| 4135589 | 601.19.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein | 0.70 | 66.0 | 5.63e-01 | 100.0% | 75.3% |
| 3567180 | 4177.1.1.61 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PLC-beta_C | 0.70 | 52.0 | 4.91e-01 | 74.9% | 100.0% |
| 3638001 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.69 | 55.0 | 5.48e-01 | 98.1% | 80.0% |
| 3596026 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.69 | 48.0 | 5.60e-01 | 70.5% | 98.7% |
| 3885225 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.68 | 49.0 | 5.47e-01 | 94.2% | 92.7% |
| 3641330 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.67 | 51.0 | 5.48e-01 | 99.0% | 90.6% |
| 4010684 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.65 | 62.0 | 4.88e-01 | 100.0% | 52.9% |
| 4977277 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.65 | 50.0 | 5.31e-01 | 94.7% | 91.7% |
| 3178993 | 192.29.1.297 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Gpi1 | 0.65 | 36.0 | 3.52e-01 | 79.7% | 48.9% |
| 4236667 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.64 | 61.0 | 5.62e-01 | 100.0% | 82.0% |
| 4976751 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.64 | 53.0 | 4.37e-01 | 100.0% | 48.8% |
| 3191222 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.62 | 58.0 | 5.60e-01 | 99.0% | 90.9% |
| 3524385 | 3881.1.1.2 ↗ | alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › Codanin-1_C | 0.61 | 40.0 | 4.52e-01 | 84.5% | 85.0% |
| 3953233 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.61 | 57.0 | 4.80e-01 | 100.0% | 61.8% |
| 3881583 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.61 | 43.0 | 4.74e-01 | 72.5% | 100.0% |
| 3925439 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.59 | 50.0 | 4.19e-01 | 89.4% | 80.3% |
| 3958437 | 633.6.1.4 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_2 | 0.59 | 34.0 | 3.71e-01 | 75.8% | 66.5% |
| 5001442 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.59 | 54.0 | 4.85e-01 | 100.0% | 91.9% |
| 4026597 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.57 | 46.0 | 4.63e-01 | 100.0% | 84.4% |
| 5046564 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.57 | 39.0 | 4.06e-01 | 88.9% | 72.8% |
| 3612163 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.56 | 40.0 | 3.87e-01 | 72.0% | 81.7% |
| 3718430 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.56 | 43.0 | 4.70e-01 | 96.6% | 98.2% |
| 4673391 | 5069.1.1.61 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › PF28674 | 0.55 | 37.0 | 4.25e-01 | 91.8% | 94.5% |
| 4014020 | 192.29.1.4 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Opi1 | 0.54 | 37.0 | 4.06e-01 | 98.1% | 82.9% |
| 4380984 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.54 | 39.0 | 3.79e-01 | 73.4% | 81.3% |
| 3772061 | 109.4.1.809 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Codanin-1_C | 0.54 | 41.0 | 3.42e-01 | 87.4% | 44.7% |
| 3842814 | 601.27.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › DUF4455 | 0.54 | 49.0 | 4.61e-01 | 98.6% | 91.4% |
| 5063060 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.53 | 39.0 | 4.07e-01 | 74.9% | 85.6% |
| 3547406 | 604.1.1.153 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4455 | 0.53 | 42.0 | 4.58e-01 | 96.1% | 100.0% |
| 3779488 | 3755.4.1.69 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF28341 | 0.53 | 38.0 | 3.87e-01 | 72.5% | 95.0% |
| 3258661 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.53 | 40.0 | 4.03e-01 | 77.8% | 80.0% |
| 3844817 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.52 | 33.0 | 3.92e-01 | 74.4% | 91.4% |
| 3581264 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 29.0 | 3.69e-01 | 71.0% | 93.3% |
| 5018371 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.51 | 38.0 | 3.97e-01 | 77.3% | 87.7% |
| 3276992 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.51 | 38.0 | 3.77e-01 | 75.8% | 80.5% |
| 4216950 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.51 | 37.0 | 3.69e-01 | 92.3% | 70.5% |
| 5063887 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.50 | 38.0 | 3.79e-01 | 93.7% | 73.6% |
| 3873386 | 3914.1.1.4 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMC | 0.50 | 38.0 | 2.91e-01 | 77.3% | 85.2% |
D2
medium
residues 235-346
Domain cluster:
representative