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MT855965.1__QNL13364.1__X__00026

Bact-Vir

MT855965.1__QNL13364.1__X__00026

Identity

Accession:
MT855965 ↗
Kingdom:
phage

Quality

62.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-63
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.73 52.0 4.05e-01 74.6% 55.2%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.68 51.0 3.71e-01 79.4% 45.6%
4pq0A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 48.0 4.26e-01 77.8% 68.8%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 47.0 4.34e-01 77.8% 74.4%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 46.0 3.98e-01 77.8% 68.6%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.64 48.0 3.95e-01 82.5% 56.3%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.63 47.0 3.70e-01 82.5% 37.2%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 47.0 3.89e-01 81.0% 93.9%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 49.0 3.13e-01 85.7% 22.4%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 44.0 2.81e-01 74.6% 38.9%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.62 45.0 4.02e-01 77.8% 58.7%
3mwxA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.61 47.0 2.96e-01 82.5% 85.7%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.61 51.0 3.61e-01 98.4% 61.0%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.61 50.0 4.17e-01 95.2% 63.3%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.61 45.0 4.03e-01 81.0% 61.7%
2qziA00 3.40.1720.10 Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like 0.60 41.0 3.51e-01 71.4% 86.1%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 3.63e-01 73.0% 85.1%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.59 42.0 4.28e-01 76.2% 93.4%
4qa8A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.59 45.0 3.16e-01 82.5% 31.4%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.58 48.0 3.81e-01 92.1% 75.4%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 47.0 4.01e-01 90.5% 75.9%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 46.0 3.72e-01 90.5% 78.0%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 3.33e-01 93.7% 82.8%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.58 45.0 3.38e-01 88.9% 82.1%
2byoA00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.57 45.0 3.32e-01 88.9% 59.6%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.89e-01 85.7% 93.5%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.57 46.0 3.75e-01 90.5% 51.6%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.56 41.0 3.00e-01 77.8% 50.0%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.56 45.0 3.90e-01 90.5% 82.2%
1x31C01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.55 43.0 3.67e-01 87.3% 55.2%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.55 43.0 3.81e-01 90.5% 75.8%
2ofqA01 2.60.40.2500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.36e-01 73.0% 83.1%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.53 40.0 3.05e-01 87.3% 49.2%
4paaA03 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.53 41.0 2.98e-01 85.7% 31.7%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 40.0 2.78e-01 87.3% 99.2%
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.50 41.0 3.83e-01 88.9% 84.8%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 42.0 2.70e-01 95.2% 79.8%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3248668 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.73 55.0 5.11e-01 81.0% 86.3%
3924612 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.69 51.0 4.05e-01 81.0% 74.8%
3743110 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.68 49.0 4.19e-01 77.8% 71.4%
4301684 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.67 51.0 3.68e-01 82.5% 44.3%
4539117 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.67 48.0 3.67e-01 76.2% 55.3%
2712015 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.67 48.0 4.49e-01 77.8% 77.8%
4960280 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 48.0 4.11e-01 74.6% 60.0%
5028466 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.65 46.0 3.74e-01 74.6% 86.7%
3468148 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 54.0 3.83e-01 93.7% 40.0%
3235531 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.64 46.0 3.12e-01 76.2% 20.0%
4977715 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 47.0 3.83e-01 77.8% 78.3%
4965206 4221.1.1.3 a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PF26008 0.64 51.0 4.98e-01 88.9% 90.0%
3436173 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 52.0 3.38e-01 93.7% 24.6%
1680145 219.1.1.43 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase 0.63 48.0 3.19e-01 84.1% 20.1%
5033093 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 50.0 4.13e-01 87.3% 78.3%
3595430 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.63 40.0 2.84e-01 71.4% 20.0%
3458699 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.62 43.0 3.27e-01 76.2% 28.8%
3225229 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 44.0 2.92e-01 81.0% 18.8%
3460207 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.60 44.0 2.87e-01 77.8% 98.5%
3425526 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.60 49.0 3.55e-01 92.1% 60.1%
3228248 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 43.0 2.81e-01 77.8% 28.4%
3240086 5.1.5.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N 0.59 45.0 2.83e-01 84.1% 26.0%
4996016 4237.1.1.1 beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.59 43.0 3.25e-01 77.8% 55.0%
4029119 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 44.0 2.78e-01 82.5% 53.1%
3427234 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 48.0 3.26e-01 93.7% 32.2%
3227356 633.23.1.4 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.58 42.0 2.99e-01 79.4% 64.2%
3961571 3699.1.1.3 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synth 0.58 41.0 3.42e-01 77.8% 94.2%
3580069 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 45.0 2.82e-01 85.7% 25.8%
4990499 2003.1.5.32 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 0.57 48.0 3.18e-01 95.2% 25.1%
3742689 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.57 45.0 2.89e-01 85.7% 25.1%
3212404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.57 43.0 2.94e-01 90.5% 21.2%
4468976 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.57 41.0 2.72e-01 79.4% 57.9%
3692594 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.57 47.0 2.89e-01 93.7% 19.8%
3242542 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 44.0 2.95e-01 90.5% 21.2%
3212555 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.56 46.0 3.70e-01 93.7% 44.6%
3227136 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 46.0 3.22e-01 93.7% 27.6%
3215907 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 47.0 3.13e-01 95.2% 25.6%
3455612 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 46.0 2.95e-01 100.0% 91.7%
3747900 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.56 44.0 2.68e-01 92.1% 32.4%
3481690 241.10.1.1 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 0.55 44.0 4.03e-01 88.9% 85.7%
3239249 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 44.0 2.98e-01 95.2% 22.4%
3228574 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 45.0 3.04e-01 93.7% 22.8%
4176398 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.55 39.0 2.68e-01 79.4% 61.1%
3235669 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 44.0 3.59e-01 93.7% 45.6%
3222725 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 46.0 3.00e-01 95.2% 20.0%
3211176 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 44.0 3.01e-01 95.2% 23.1%
5037561 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.54 39.0 3.23e-01 77.8% 97.5%
3935730 241.10.1.1 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 0.54 47.0 4.20e-01 100.0% 70.0%
3218627 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 41.0 2.95e-01 92.1% 25.6%
3226293 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 41.0 2.84e-01 92.1% 21.5%
3236616 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 42.0 2.86e-01 93.7% 21.1%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 43.0 2.93e-01 95.2% 22.8%
3192398 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 42.0 2.57e-01 93.7% 76.7%
3229102 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 41.0 2.81e-01 92.1% 22.0%
3243587 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.52 43.0 2.81e-01 95.2% 22.9%
3225057 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.52 41.0 3.07e-01 95.2% 31.4%
3244243 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.52 41.0 3.00e-01 95.2% 29.7%
5036807 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.52 42.0 3.73e-01 93.7% 97.9%
5038850 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.51 39.0 3.55e-01 84.1% 65.6%
3386489 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.51 38.0 2.96e-01 90.5% 31.8%
3222321 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 40.0 2.79e-01 92.1% 23.5%
4862662 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.51 41.0 2.67e-01 95.2% 26.7%
3409029 331.23.1.2 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C 0.50 39.0 3.79e-01 87.3% 87.8%
D2 medium residues 64-118
PDB