←Back to structures
MT856905.1__QNL31140.1__A2_72__00072
Bact-VirMT856905.1__QNL31140.1__A2_72__00072
Identity
- Accession:
- MT856905 ↗
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Schiekvirus›
Enterococcus_phage_vB_EfaM_A2
TaxID: 2767513
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-58
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lioA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.68 | 48.0 | 3.66e-01 | 74.1% | 91.9% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.65 | 42.0 | 4.43e-01 | 77.6% | 76.5% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 45.0 | 3.87e-01 | 75.9% | 88.0% |
| 1u5kA03 | 6.20.220.20 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › Recombination protein O, zinc-binding domain | 0.61 | 35.0 | 4.12e-01 | 72.4% | 94.3% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 43.0 | 4.18e-01 | 77.6% | 89.4% |
| 2uzgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 43.0 | 3.81e-01 | 84.5% | 49.5% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 40.0 | 3.24e-01 | 77.6% | 33.9% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 41.0 | 3.53e-01 | 87.9% | 44.4% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 43.0 | 3.98e-01 | 86.2% | 63.7% |
| 1xa6A02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.56 | 39.0 | 3.72e-01 | 84.5% | 62.3% |
| 4msxA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 38.0 | 3.37e-01 | 84.5% | 45.2% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 40.0 | 3.47e-01 | 82.8% | 47.9% |
| 3viuA04 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.54 | 43.0 | 3.12e-01 | 89.7% | 75.7% |
| 3vd6C01 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.54 | 34.0 | 3.79e-01 | 72.4% | 90.2% |
| 1z6uA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 40.0 | 3.33e-01 | 86.2% | 43.5% |
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 39.0 | 3.55e-01 | 81.0% | 61.3% |
| 2gatA00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.52 | 33.0 | 3.27e-01 | 72.4% | 57.6% |
| 2csyA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 36.0 | 3.62e-01 | 79.3% | 73.3% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.51 | 37.0 | 3.83e-01 | 91.4% | 87.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3270567 | 376.1.1.128 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-4CXXC_R1 | 0.64 | 45.0 | 4.32e-01 | 75.9% | 85.7% |
| 3483069 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 39.0 | 4.25e-01 | 75.9% | 77.8% |
| 3250122 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 47.0 | 4.02e-01 | 84.5% | 54.0% |
| 3674262 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 44.0 | 4.70e-01 | 75.9% | 100.0% |
| 4263665 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 46.0 | 4.70e-01 | 79.3% | 96.4% |
| 3173191 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.59 | 43.0 | 4.43e-01 | 89.7% | 81.8% |
| 3210983 | 376.1.2.36 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-C3HC4 | 0.59 | 44.0 | 4.62e-01 | 84.5% | 94.0% |
| 3415372 | 376.1.1.70 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Sina_RING | 0.59 | 42.0 | 3.92e-01 | 84.5% | 60.0% |
| 3809535 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.58 | 41.0 | 4.10e-01 | 75.9% | 85.0% |
| 3388738 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.58 | 42.0 | 4.31e-01 | 79.3% | 96.4% |
| 3256291 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 42.0 | 4.00e-01 | 86.2% | 65.7% |
| 3412323 | 377.1.1.18 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD | 0.58 | 45.0 | 4.21e-01 | 87.9% | 90.7% |
| 3955895 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.57 | 45.0 | 4.62e-01 | 89.7% | 92.7% |
| 3271906 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.56 | 43.0 | 4.35e-01 | 89.7% | 83.1% |
| 3865789 | 386.1.1.223 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › GATA | 0.56 | 40.0 | 3.93e-01 | 89.7% | 69.2% |
| 3347377 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.55 | 38.0 | 4.33e-01 | 72.4% | 97.7% |
| 4931771 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 44.0 | 3.73e-01 | 89.7% | 78.0% |
| 3397947 | 376.1.1.70 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Sina_RING | 0.55 | 39.0 | 3.34e-01 | 86.2% | 42.6% |
| 3829583 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 41.0 | 3.72e-01 | 82.8% | 65.0% |
| 3594777 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 40.0 | 3.53e-01 | 84.5% | 54.7% |
| 4026105 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 42.0 | 3.78e-01 | 91.4% | 61.3% |
| 3195372 | 376.1.1.67 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3H2C3 | 0.54 | 43.0 | 4.00e-01 | 94.8% | 92.5% |
| 3167141 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 39.0 | 3.87e-01 | 82.8% | 89.2% |
| 3626895 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.53 | 40.0 | 3.30e-01 | 86.2% | 45.0% |
| 3830897 | 3543.1.1.4 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 | 0.53 | 47.0 | 2.96e-01 | 96.6% | 43.3% |
| 3323968 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.53 | 34.0 | 3.26e-01 | 72.4% | 54.4% |
| 3248283 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.53 | 39.0 | 4.08e-01 | 94.8% | 96.0% |
| 3569569 | 375.1.1.129 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › GATA | 0.51 | 33.0 | 3.77e-01 | 89.7% | 95.0% |
| 3806688 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.51 | 37.0 | 3.74e-01 | 81.0% | 90.0% |
| 4342292 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.51 | 35.0 | 3.64e-01 | 81.0% | 81.8% |
| 3519832 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.51 | 43.0 | 2.58e-01 | 100.0% | 18.7% |
| 3397226 | 377.1.1.18 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD | 0.50 | 41.0 | 3.46e-01 | 94.8% | 97.1% |