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MT863723.1__QPX64432.1__F361_135__00135

Bact-Vir

MT863723.1__QPX64432.1__F361_135__00135

Identity

Accession:
MT863723 ↗
Kingdom:
phage

Quality

91.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-50_96-112_132-154_175-194
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5suhB01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.60 41.0 4.30e-01 82.9% 75.8%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.59 46.0 3.90e-01 81.9% 96.4%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 37.0 4.04e-01 82.9% 80.2%
2j0wA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 34.0 3.80e-01 85.7% 79.0%
6aieA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 3.45e-01 78.1% 85.7%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.55 42.0 3.22e-01 81.9% 59.8%
4iscA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 39.0 3.48e-01 77.1% 93.6%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 36.0 4.03e-01 81.0% 90.1%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 39.0 3.29e-01 78.1% 94.6%
2fpoC00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 39.0 3.27e-01 79.0% 86.7%
4q9bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 3.85e-01 98.1% 82.2%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.50 35.0 3.48e-01 94.3% 68.5%
1hxmB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.92e-01 100.0% 81.9%
3kgyA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.50 35.0 2.77e-01 73.3% 97.2%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1501 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 37.0 3.88e-01 82.9% 73.4%
5028345 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.55 38.0 3.10e-01 71.4% 83.9%
3283780 2003.1.5.32 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 0.53 41.0 3.42e-01 81.0% 89.1%
3976969 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 36.0 3.26e-01 70.5% 87.2%
3165733 2003.1.5.32 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 0.52 39.0 3.17e-01 77.1% 81.9%
5058197 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 37.0 4.29e-01 82.9% 100.0%
4980090 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 34.0 3.90e-01 80.0% 88.7%
4934590 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 35.0 3.75e-01 84.8% 77.9%
5068015 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.52 36.0 4.22e-01 81.0% 100.0%
4135983 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.50 39.0 4.03e-01 99.0% 87.0%
4988969 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.50 36.0 4.13e-01 83.8% 100.0%
4987233 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.50 37.0 4.10e-01 85.7% 95.3%
D2 medium residues 51-95_113-131_155-174
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yzcA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.53 45.0 3.21e-01 100.0% 83.3%
1yq2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.32e-01 75.0% 66.1%
5ce6A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.50 39.0 2.80e-01 84.5% 82.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3495218 922.1.1.9 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_2 0.55 29.0 3.66e-01 73.8% 88.0%