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MT880870.1__QPB07585.1__PLKLOBMN_00014__00014
Bact-VirMT880870.1__QPB07585.1__PLKLOBMN_00014__00014
Identity
- Accession:
- MT880870 ↗
- Kingdom:
- phage
Quality
91.5
mean pLDDT
Taxonomy
TaxID: 2782524
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-97
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 36.0 | 3.98e-01 | 71.3% | 56.4% |
| 3pukA03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.66 | 30.0 | 2.95e-01 | 74.5% | 38.2% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 44.0 | 3.87e-01 | 85.1% | 73.4% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 3.28e-01 | 77.7% | 55.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034522 | 857.1.1.2 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › PVL_ORF50 | 0.83 | 75.0 | 7.53e-01 | 96.8% | 97.9% |
| 4979643 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.67 | 44.0 | 3.87e-01 | 80.9% | 48.5% |
| 4501070 | 192.29.1.204 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › eIF-4B | 0.66 | 37.0 | 3.73e-01 | 72.3% | 54.7% |
| 3638257 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.66 | 47.0 | 4.26e-01 | 78.7% | 57.5% |
| 4119921 | 1128.1.1.23 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Ycf66_N | 0.62 | 45.0 | 4.58e-01 | 75.5% | 100.0% |
| 3634303 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.58 | 35.0 | 3.08e-01 | 81.9% | 43.1% |
| 4385210 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.54 | 47.0 | 3.76e-01 | 94.7% | 75.7% |
| 4930987 | 3447.1.1.3 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › DUF1295 | 0.51 | 39.0 | 3.09e-01 | 80.9% | 54.2% |
| 4033041 | 3227.1.1.2 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC_2 | 0.50 | 41.0 | 2.90e-01 | 91.5% | 47.0% |
| 4957378 | 622.4.1.68 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › DUF5788 | 0.50 | 32.0 | 3.02e-01 | 70.2% | 54.5% |