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MT880870.1__QPB07601.1__PLKLOBMN_00030__00030

Bact-Vir

MT880870.1__QPB07601.1__PLKLOBMN_00030__00030

Identity

Accession:
MT880870 ↗
Kingdom:
phage

Quality

70.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Staphylococcus_phage_PhiSepi-HH1

TaxID: 2782524

Cluster

View cluster (27 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-190
PDB
Domain cluster: rep: KR816341.1__AKQ06892.1__X__00033__D8-203
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04630.19 best Phage_TTP_1 39.0 8.00e-10 97.8% 65.3%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 40.0 4.54e-01 94.4% 92.0%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 39.0 4.37e-01 97.2% 86.7%
3pfeA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 27.0 3.12e-01 90.6% 61.5%
2cz4A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 25.0 3.26e-01 77.2% 78.8%
3kmuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 24.0 3.19e-01 90.6% 83.9%
1qhlA00 3.40.1140.10 Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › 0.50 36.0 3.50e-01 100.0% 65.0%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030848 1.1.13.52 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 0.94 83.0 8.82e-01 98.3% 100.0%
3589778 1.1.5.78 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_TTP_1 0.92 84.0 8.70e-01 100.0% 98.8%
4032554 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.87 73.0 7.65e-01 98.3% 93.9%
3590380 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 79.0 7.92e-01 100.0% 97.2%
5004308 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 64.0 6.87e-01 93.9% 96.8%
2471641 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.77 57.0 6.20e-01 93.3% 91.3%
2101663 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.74 58.0 6.11e-01 91.1% 90.2%
3980535 1.1.13.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.69 50.0 5.74e-01 96.7% 100.0%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.69 49.0 5.28e-01 95.6% 84.6%
3211236 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.68 28.0 4.48e-01 93.3% 98.6%
5004559 1.1.13.75 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.62 45.0 5.15e-01 80.0% 100.0%
3265120 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 51.0 5.20e-01 96.7% 91.4%
3264744 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.59 50.0 5.13e-01 96.7% 91.4%
5007084 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.56 33.0 4.15e-01 97.2% 99.0%
4050380 1.1.7.95 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 0.54 29.0 3.87e-01 97.2% 98.9%
4131100 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.53 31.0 3.50e-01 86.1% 74.1%
4986730 1.1.9.23 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.52 35.0 4.08e-01 90.0% 97.6%
3799143 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.51 28.0 3.24e-01 99.4% 71.1%