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MT880872.1__QPB07787.1__PLKLOBMN_00216__00120
Bact-VirMT880872.1__QPB07787.1__PLKLOBMN_00216__00120
Identity
- Accession:
- MT880872 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Taxonomy
TaxID: 2782522
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-89
Domain cluster:
rep: IMGVR_UViG_3300009509_000914-3300009509-Ga0123573_1001185116__D5-80
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.87 | 64.0 | 5.95e-01 | 100.0% | 62.7% |
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.86 | 66.0 | 5.68e-01 | 100.0% | 54.5% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.78 | 61.0 | 4.90e-01 | 100.0% | 43.7% |
| 3go5A01 | 2.40.50.330 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 51.0 | 5.44e-01 | 97.6% | 81.7% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 69.0 | 5.23e-01 | 100.0% | 74.3% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.74 | 68.0 | 5.84e-01 | 100.0% | 76.4% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 69.0 | 6.30e-01 | 100.0% | 83.7% |
| 2k5vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 65.0 | 6.09e-01 | 100.0% | 81.6% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 65.0 | 6.20e-01 | 100.0% | 85.4% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 66.0 | 6.41e-01 | 100.0% | 93.3% |
| 3nqiA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.71 | 51.0 | 5.67e-01 | 100.0% | 96.9% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 51.0 | 5.55e-01 | 97.6% | 100.0% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 62.0 | 6.00e-01 | 98.8% | 96.7% |
| 2b39A13 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 62.0 | 5.19e-01 | 100.0% | 65.4% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.67 | 51.0 | 5.43e-01 | 98.8% | 95.7% |
| 2iciA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 55.0 | 5.69e-01 | 100.0% | 96.2% |
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 58.0 | 5.46e-01 | 100.0% | 77.5% |
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.67 | 56.0 | 5.58e-01 | 100.0% | 88.4% |
| 1xweA01 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 60.0 | 5.00e-01 | 100.0% | 62.9% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.65 | 48.0 | 4.68e-01 | 78.3% | 100.0% |
| 2e8gA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 53.0 | 4.72e-01 | 100.0% | 64.7% |
| 6mavB02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 57.0 | 5.62e-01 | 100.0% | 96.6% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 55.0 | 4.76e-01 | 100.0% | 75.9% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 55.0 | 4.97e-01 | 100.0% | 73.4% |
| 2r6hA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 46.0 | 3.87e-01 | 79.5% | 99.3% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.62 | 55.0 | 5.38e-01 | 100.0% | 94.4% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 53.0 | 4.79e-01 | 97.6% | 81.6% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.60 | 44.0 | 4.03e-01 | 77.1% | 94.5% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 44.0 | 4.19e-01 | 80.7% | 95.9% |
| 1eujA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 52.0 | 4.18e-01 | 100.0% | 52.4% |
| 1tvcA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 43.0 | 3.95e-01 | 78.3% | 92.7% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.57 | 40.0 | 3.91e-01 | 74.7% | 97.8% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 46.0 | 4.75e-01 | 100.0% | 94.9% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 49.0 | 4.52e-01 | 100.0% | 78.4% |
| 5fl4A00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.53 | 45.0 | 3.34e-01 | 100.0% | 70.1% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 44.0 | 4.52e-01 | 98.8% | 98.7% |
| 1o75A02 | 2.30.30.470 | Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B | 0.51 | 30.0 | 2.71e-01 | 90.4% | 42.0% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 37.0 | 3.34e-01 | 78.3% | 79.5% |
| 2bj0A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.51 | 43.0 | 3.31e-01 | 96.4% | 83.7% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4323154 | 2.1.1.341 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30208 | 0.86 | 62.0 | 5.50e-01 | 100.0% | 53.9% |
| 5025524 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.85 | 66.0 | 6.20e-01 | 98.8% | 68.0% |
| 3589263 | 2.1.1.222 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_YrrC | 0.84 | 73.0 | 7.50e-01 | 100.0% | 96.2% |
| 3838618 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.83 | 67.0 | 6.25e-01 | 97.6% | 70.0% |
| 3356732 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.81 | 64.0 | 5.56e-01 | 100.0% | 57.5% |
| 3214896 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 63.0 | 5.75e-01 | 100.0% | 63.6% |
| 5081145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 67.0 | 6.54e-01 | 100.0% | 82.2% |
| 4120870 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.80 | 67.0 | 6.04e-01 | 100.0% | 67.3% |
| 3963505 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.79 | 66.0 | 6.02e-01 | 100.0% | 69.5% |
| 4270030 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.79 | 58.0 | 6.48e-01 | 98.8% | 98.5% |
| 4101241 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.78 | 66.0 | 6.20e-01 | 100.0% | 75.0% |
| 4187609 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.78 | 68.0 | 6.48e-01 | 100.0% | 81.1% |
| 4240090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.78 | 67.0 | 6.22e-01 | 100.0% | 75.0% |
| 3386820 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.78 | 66.0 | 6.00e-01 | 98.8% | 69.4% |
| 4348646 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.78 | 67.0 | 6.13e-01 | 100.0% | 72.4% |
| 4600925 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 67.0 | 6.36e-01 | 100.0% | 80.0% |
| 4682409 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.78 | 68.0 | 4.40e-01 | 98.8% | 22.9% |
| 4033869 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.77 | 66.0 | 6.10e-01 | 100.0% | 72.4% |
| 4450697 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.77 | 65.0 | 4.36e-01 | 100.0% | 25.4% |
| 4039730 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.77 | 65.0 | 6.02e-01 | 100.0% | 72.4% |
| 4940786 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 66.0 | 6.34e-01 | 100.0% | 81.1% |
| 4065889 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.77 | 66.0 | 4.41e-01 | 100.0% | 26.7% |
| 4609120 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.77 | 66.0 | 6.48e-01 | 100.0% | 85.6% |
| 4321619 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.76 | 66.0 | 6.08e-01 | 100.0% | 73.3% |
| 4309540 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.76 | 65.0 | 6.01e-01 | 100.0% | 72.4% |
| 4369732 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 68.0 | 6.16e-01 | 100.0% | 72.7% |
| 5058787 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.76 | 65.0 | 5.88e-01 | 100.0% | 69.1% |
| 4337719 | 2.3.1.3 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NtA | 0.76 | 69.0 | 5.92e-01 | 100.0% | 74.6% |
| 3604365 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 70.0 | 6.42e-01 | 100.0% | 81.0% |
| 4975146 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 65.0 | 5.46e-01 | 100.0% | 57.0% |
| 3488538 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 69.0 | 5.88e-01 | 100.0% | 67.7% |
| 3392389 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 69.0 | 6.05e-01 | 100.0% | 82.5% |
| 4188423 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.74 | 65.0 | 5.61e-01 | 100.0% | 62.4% |
| 4970159 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 65.0 | 6.24e-01 | 100.0% | 83.2% |
| 4942077 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.74 | 69.0 | 5.50e-01 | 100.0% | 77.4% |
| 4192004 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.74 | 57.0 | 6.18e-01 | 97.6% | 97.1% |
| 4932742 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 68.0 | 5.94e-01 | 100.0% | 81.7% |
| 5035746 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 68.0 | 5.43e-01 | 100.0% | 78.7% |
| 5037223 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.73 | 49.0 | 5.66e-01 | 88.0% | 96.7% |
| 3399810 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.73 | 64.0 | 6.23e-01 | 100.0% | 86.7% |
| 5058144 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 67.0 | 5.55e-01 | 100.0% | 90.7% |
| 5062589 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 61.0 | 5.20e-01 | 100.0% | 57.7% |
| 4988038 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 67.0 | 5.85e-01 | 100.0% | 86.7% |
| 4600598 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 66.0 | 5.84e-01 | 100.0% | 71.3% |
| 4031715 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.72 | 62.0 | 5.60e-01 | 100.0% | 70.0% |
| 4954096 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.72 | 66.0 | 5.38e-01 | 100.0% | 91.2% |
| 4071867 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 61.0 | 5.28e-01 | 100.0% | 60.8% |
| 4937102 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 67.0 | 5.44e-01 | 100.0% | 88.3% |
| 4940588 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 65.0 | 5.49e-01 | 98.8% | 89.5% |
| 5041946 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 60.0 | 6.27e-01 | 100.0% | 98.7% |
| 4954679 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 56.0 | 6.03e-01 | 96.4% | 100.0% |
| 4950307 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 56.0 | 5.75e-01 | 100.0% | 88.7% |
| 5076490 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.71 | 65.0 | 5.17e-01 | 100.0% | 81.2% |
| 3700345 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 63.0 | 5.73e-01 | 100.0% | 85.5% |
| 3830803 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 59.0 | 5.57e-01 | 98.8% | 88.6% |
| 3211783 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 54.0 | 5.45e-01 | 100.0% | 83.5% |
| 3687330 | 2.1.1.247 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29077 | 0.69 | 62.0 | 5.20e-01 | 100.0% | 72.1% |
| 3730323 | 2.1.1.247 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29077 | 0.68 | 62.0 | 5.40e-01 | 100.0% | 81.6% |
| 4479389 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.68 | 60.0 | 5.36e-01 | 100.0% | 69.6% |
| 998700 | 2.18.1.1 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N | 0.67 | 51.0 | 5.29e-01 | 98.8% | 89.3% |
| 3738532 | 2.1.1.21 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 | 0.67 | 50.0 | 5.02e-01 | 100.0% | 78.8% |
| 4181914 | 2.1.1.16 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind | 0.65 | 58.0 | 4.96e-01 | 100.0% | 81.5% |
| 3402635 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 48.0 | 4.13e-01 | 79.5% | 93.3% |
| 4025155 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 58.0 | 4.81e-01 | 100.0% | 57.9% |
| 4028319 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 46.0 | 3.91e-01 | 74.7% | 93.3% |
| 3834903 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.64 | 53.0 | 5.03e-01 | 100.0% | 75.0% |
| 3169095 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.64 | 53.0 | 5.34e-01 | 100.0% | 89.4% |
| 4024475 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.63 | 53.0 | 5.41e-01 | 100.0% | 95.0% |
| 3274510 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.63 | 47.0 | 4.94e-01 | 100.0% | 89.3% |
| 5057050 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 55.0 | 4.83e-01 | 97.6% | 99.2% |
| 4807965 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.62 | 52.0 | 4.97e-01 | 100.0% | 77.6% |
| 3430247 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.62 | 51.0 | 4.77e-01 | 100.0% | 72.1% |
| 4600806 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.62 | 51.0 | 4.68e-01 | 100.0% | 69.1% |
| 3489010 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 54.0 | 4.70e-01 | 100.0% | 65.6% |
| 3402269 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.60 | 50.0 | 4.58e-01 | 100.0% | 69.1% |
| 4029250 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 53.0 | 5.25e-01 | 100.0% | 100.0% |
| 3703133 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 52.0 | 4.98e-01 | 100.0% | 89.5% |
| 377 | 2.1.1.90 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ssDBP | 0.53 | 44.0 | 4.52e-01 | 98.8% | 98.7% |
| 4491369 | 2003.1.3.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo | 0.53 | 36.0 | 2.52e-01 | 71.1% | 77.7% |
| 5070341 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.51 | 37.0 | 3.31e-01 | 78.3% | 96.0% |
D2
high
residues 197-293
Domain cluster:
rep: BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00093__D192-287
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14490.12 best | HHH_RecD2 | 37.8 | 2.20e-09 | 51.5% | 54.4% |
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 56.0 | 6.06e-01 | 71.1% | 96.3% |
| 3e1sA01 | 1.10.10.2220 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.79 | 69.0 | 7.01e-01 | 92.8% | 100.0% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 5.29e-01 | 70.1% | 77.2% |
| 2ma3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 5.42e-01 | 93.8% | 78.4% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 48.0 | 5.43e-01 | 74.2% | 89.0% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 5.79e-01 | 75.3% | 93.8% |
| 3cuqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 49.0 | 5.32e-01 | 70.1% | 95.0% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.39e-01 | 95.9% | 81.5% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 45.0 | 4.64e-01 | 70.1% | 67.7% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.70 | 53.0 | 5.87e-01 | 79.4% | 100.0% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 47.0 | 5.31e-01 | 76.3% | 93.2% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 5.05e-01 | 94.8% | 79.8% |
| 1q1vA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 43.0 | 4.92e-01 | 76.3% | 90.0% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 4.46e-01 | 79.4% | 57.1% |
| 1zelA01 | 3.90.56.20 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › replication protein C, winged helix domain | 0.66 | 48.0 | 4.85e-01 | 94.8% | 75.5% |
| 2ly1A03 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.66 | 48.0 | 5.17e-01 | 94.8% | 90.1% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 5.17e-01 | 95.9% | 80.6% |
| 2fmlB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 42.0 | 4.94e-01 | 95.9% | 100.0% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 46.0 | 4.50e-01 | 73.2% | 75.2% |
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.65 | 48.0 | 4.29e-01 | 78.4% | 61.6% |
| 2vxzA02 | 1.10.10.1490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 46.0 | 4.83e-01 | 74.2% | 98.9% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.27e-01 | 84.5% | 53.4% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 40.0 | 4.57e-01 | 72.2% | 98.5% |
| 4f7aA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 55.0 | 3.47e-01 | 100.0% | 65.3% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.59 | 37.0 | 3.90e-01 | 73.2% | 70.1% |
| 2k7bA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 38.0 | 4.18e-01 | 95.9% | 82.9% |
| 1yz5B00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.57 | 48.0 | 3.67e-01 | 92.8% | 49.8% |
| 8amzT01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 51.0 | 3.73e-01 | 100.0% | 45.1% |
| 1qzyA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 46.0 | 3.38e-01 | 89.7% | 53.6% |
| 2zsgA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 41.0 | 3.14e-01 | 77.3% | 98.2% |
| 1tuzA00 | 1.10.238.110 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. | 0.56 | 40.0 | 3.75e-01 | 74.2% | 69.5% |
| 4kvmA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 44.0 | 2.85e-01 | 90.7% | 16.9% |
| 2bl0B01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 33.0 | 3.79e-01 | 95.9% | 85.3% |
| 1ulqA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 40.0 | 3.32e-01 | 99.0% | 42.1% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.54 | 40.0 | 3.65e-01 | 78.4% | 58.3% |
| 1a75A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 43.0 | 4.25e-01 | 88.7% | 93.4% |
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 35.0 | 3.99e-01 | 82.5% | 90.5% |
| 2cwyA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.52 | 44.0 | 4.51e-01 | 100.0% | 98.9% |
| 1qxyA00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.52 | 38.0 | 2.91e-01 | 78.4% | 90.4% |
| 5xyjA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 37.0 | 3.25e-01 | 97.9% | 47.1% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 40.0 | 3.21e-01 | 84.5% | 57.2% |
| 1omvA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 34.0 | 3.54e-01 | 96.9% | 74.4% |
| 3n71A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 3.39e-01 | 93.8% | 43.7% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 42.0 | 3.98e-01 | 93.8% | 82.9% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589265 | 101.1.2.145 ↗ | alpha arrays › HTH › HTH › winged helix domain › HHH_4 | 0.89 | 72.0 | 7.49e-01 | 84.5% | 100.0% |
| 3603693 | 101.1.2.145 ↗ | alpha arrays › HTH › HTH › winged helix domain › HHH_4 | 0.85 | 76.0 | 6.20e-01 | 95.9% | 71.8% |
| 4175293 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 57.0 | 6.08e-01 | 70.1% | 95.3% |
| 5045142 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 57.0 | 6.36e-01 | 72.2% | 88.5% |
| 3167236 | 148.1.3.31 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM4_WHD | 0.81 | 57.0 | 6.10e-01 | 72.2% | 88.2% |
| 4972208 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.80 | 57.0 | 5.89e-01 | 73.2% | 88.9% |
| 4978321 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.80 | 56.0 | 5.88e-01 | 73.2% | 86.7% |
| 4942782 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.79 | 55.0 | 6.02e-01 | 72.2% | 87.3% |
| 2417725 | 101.1.2.467 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_Rok | 0.79 | 55.0 | 5.44e-01 | 75.3% | 68.0% |
| 5020732 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 53.0 | 6.08e-01 | 73.2% | 94.3% |
| 3552400 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.78 | 57.0 | 4.00e-01 | 76.3% | 36.9% |
| 5077611 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 53.0 | 4.87e-01 | 70.1% | 55.2% |
| 5075222 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 52.0 | 5.69e-01 | 78.4% | 82.5% |
| 3841412 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.78 | 54.0 | 5.07e-01 | 71.1% | 65.2% |
| 5042147 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.77 | 54.0 | 5.92e-01 | 72.2% | 87.5% |
| 5054311 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.77 | 54.0 | 5.59e-01 | 72.2% | 79.8% |
| 3604595 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.77 | 54.0 | 5.94e-01 | 73.2% | 89.9% |
| 5048178 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 56.0 | 6.07e-01 | 79.4% | 92.5% |
| 3830447 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.76 | 53.0 | 5.79e-01 | 72.2% | 96.2% |
| 4991298 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 53.0 | 5.72e-01 | 72.2% | 86.3% |
| 3392391 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.76 | 54.0 | 5.99e-01 | 73.2% | 94.7% |
| 4998818 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.76 | 57.0 | 3.83e-01 | 78.4% | 38.8% |
| 4996074 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 52.0 | 5.65e-01 | 81.4% | 85.0% |
| 3382056 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 53.0 | 3.35e-01 | 72.2% | 16.0% |
| 4028668 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 49.0 | 5.82e-01 | 70.1% | 100.0% |
| 4977854 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 50.0 | 5.35e-01 | 81.4% | 77.6% |
| 3772634 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.75 | 53.0 | 5.78e-01 | 73.2% | 90.0% |
| 4948021 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 5.71e-01 | 74.2% | 87.5% |
| 5000849 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 47.0 | 5.38e-01 | 70.1% | 87.1% |
| 3476729 | 101.1.2.397 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 | 0.75 | 55.0 | 5.74e-01 | 76.3% | 89.8% |
| 3611503 | 101.1.2.499 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 | 0.75 | 50.0 | 5.63e-01 | 97.9% | 89.3% |
| 4947375 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 50.0 | 5.41e-01 | 81.4% | 82.5% |
| 3232527 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 54.0 | 5.32e-01 | 76.3% | 88.6% |
| 4972049 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 51.0 | 4.98e-01 | 81.4% | 64.8% |
| 3781009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 52.0 | 3.74e-01 | 73.2% | 29.5% |
| 3744213 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.74 | 51.0 | 4.49e-01 | 71.1% | 57.1% |
| 5030726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 45.0 | 5.56e-01 | 70.1% | 100.0% |
| 5007881 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.74 | 53.0 | 5.56e-01 | 75.3% | 88.9% |
| 4946714 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.73 | 58.0 | 6.05e-01 | 84.5% | 100.0% |
| 5042180 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 51.0 | 5.57e-01 | 91.8% | 88.6% |
| 3369911 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 52.0 | 5.45e-01 | 78.4% | 81.1% |
| 3866769 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 51.0 | 5.14e-01 | 72.2% | 81.1% |
| 4124327 | 101.1.2.490 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 | 0.72 | 51.0 | 5.25e-01 | 72.2% | 82.2% |
| 3994510 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 64.0 | 5.65e-01 | 96.9% | 72.9% |
| 4963349 | 101.1.2.912 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF5830 | 0.72 | 47.0 | 4.43e-01 | 71.1% | 55.7% |
| 3883014 | 101.1.2.490 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 | 0.72 | 50.0 | 5.44e-01 | 72.2% | 97.5% |
| 3270341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 53.0 | 5.41e-01 | 78.4% | 85.3% |
| 5073255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 57.0 | 5.73e-01 | 89.7% | 84.0% |
| 4948481 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.71 | 49.0 | 3.54e-01 | 71.1% | 31.8% |
| 3282607 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 51.0 | 4.68e-01 | 84.5% | 60.0% |
| 5073785 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.69 | 56.0 | 5.53e-01 | 88.7% | 95.2% |
| 3575012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 47.0 | 5.26e-01 | 75.3% | 92.0% |
| 3717176 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 51.0 | 4.76e-01 | 78.4% | 85.8% |
| 4999099 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 46.0 | 4.50e-01 | 95.9% | 66.0% |
| 3284140 | 101.1.2.87 ↗ | alpha arrays › HTH › HTH › winged helix domain › PaaX | 0.67 | 51.0 | 5.19e-01 | 96.9% | 83.2% |
| 4972260 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 54.0 | 5.48e-01 | 95.9% | 88.4% |
| 3829946 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.65 | 53.0 | 4.51e-01 | 87.6% | 57.5% |
| 5069163 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 50.0 | 4.81e-01 | 94.8% | 70.9% |
| 5074872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 50.0 | 5.18e-01 | 97.9% | 86.7% |
| 4991175 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 53.0 | 5.50e-01 | 96.9% | 92.2% |
| 3602641 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 48.0 | 3.67e-01 | 76.3% | 35.3% |
| 3597003 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.65 | 54.0 | 4.49e-01 | 90.7% | 62.9% |
| 4940719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 57.0 | 4.92e-01 | 97.9% | 73.9% |
| 4944171 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.64 | 58.0 | 5.07e-01 | 97.9% | 81.4% |
| 3568884 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.63 | 56.0 | 4.75e-01 | 100.0% | 71.5% |
| 3691691 | 101.1.2.77 ↗ | alpha arrays › HTH › HTH › winged helix domain › ESCRT-II | 0.63 | 51.0 | 4.84e-01 | 90.7% | 99.2% |
| 4972180 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 5.23e-01 | 87.6% | 100.0% |
| 3739861 | 101.1.2.198 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH | 0.62 | 56.0 | 5.24e-01 | 95.9% | 82.6% |
| 3252984 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 44.0 | 4.57e-01 | 97.9% | 78.9% |
| 3223085 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.61 | 48.0 | 4.98e-01 | 84.5% | 100.0% |
| 5046890 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 52.0 | 4.59e-01 | 99.0% | 65.7% |
| 4488173 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 5.10e-01 | 95.9% | 96.7% |
| 3569524 | 108.1.1.48 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_9 | 0.58 | 39.0 | 4.20e-01 | 96.9% | 83.7% |
| 3177663 | 109.4.1.1696 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29070 | 0.58 | 51.0 | 4.03e-01 | 100.0% | 51.7% |
| 4985856 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.57 | 41.0 | 3.12e-01 | 75.3% | 65.4% |
| 3526631 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 39.0 | 2.92e-01 | 89.7% | 27.6% |
| 3441652 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 49.0 | 3.02e-01 | 100.0% | 28.2% |
| 4947817 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.55 | 39.0 | 3.00e-01 | 75.3% | 65.7% |
| 5076211 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 49.0 | 4.71e-01 | 99.0% | 99.1% |
| 4367467 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 42.0 | 3.33e-01 | 87.6% | 94.2% |
| 3601110 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 43.0 | 3.41e-01 | 87.6% | 82.9% |
| 5045522 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 48.0 | 3.56e-01 | 100.0% | 94.3% |
| 1145754 | 239.4.1.2 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › GSIII_N | 0.52 | 36.0 | 3.44e-01 | 89.7% | 60.3% |
| 3831457 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 45.0 | 2.89e-01 | 97.9% | 30.8% |
D3
high
residues 333-481
Domain cluster:
rep: NC_074643__YP_010772404.1__QIT40-gp03__00003__D149-351
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13604.13 best | AAA_30 | 105.0 | 6.00e-30 | 100.0% | 75.9% |
| PF01443.25 | Viral_helicase1 | 32.2 | 1.40e-07 | 88.6% | 47.4% |
| PF13245.13 | AAA_19 | 100.6 | 1.20e-28 | 85.9% | 98.5% |
D4
medium
residues 95-194
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w9mA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.75 | 50.0 | 5.97e-01 | 93.0% | 100.0% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.64 | 49.0 | 4.58e-01 | 82.0% | 82.5% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 34.0 | 3.40e-01 | 99.0% | 57.3% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.55 | 33.0 | 3.49e-01 | 98.0% | 67.0% |
| 2xgjA04 | 1.20.1500.20 | Mainly Alpha › Up-down Bundle › YheA-like fold › | 0.51 | 34.0 | 3.19e-01 | 94.0% | 51.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949223 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.61 | 54.0 | 4.64e-01 | 100.0% | 80.0% |
| 4380943 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.59 | 53.0 | 4.54e-01 | 100.0% | 80.0% |
| 3592 | 632.12.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Vng1086c-like › Vng1086c-like › UPF0058 | 0.55 | 33.0 | 3.47e-01 | 98.0% | 66.3% |
| 3840045 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 37.0 | 4.06e-01 | 94.0% | 88.7% |