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MT889391.1__QOP66579.1__PBI_MINIMAC_118__00109
Bact-VirMT889391.1__QOP66579.1__PBI_MINIMAC_118__00109
Identity
- Accession:
- MT889391 ↗
- Kingdom:
- phage
Quality
66.1
mean pLDDT
Taxonomy
TaxID: 2776880
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 73-116
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 65.0 | 5.40e-01 | 100.0% | 51.2% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 4.38e-01 | 100.0% | 36.4% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 4.20e-01 | 100.0% | 32.1% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 5.13e-01 | 100.0% | 68.3% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.65e-01 | 100.0% | 47.8% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 4.41e-01 | 100.0% | 46.1% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 4.64e-01 | 100.0% | 55.1% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 42.0 | 3.07e-01 | 86.4% | 22.0% |
| 1g2hA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 52.0 | 4.80e-01 | 97.7% | 65.6% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 50.0 | 4.99e-01 | 100.0% | 83.3% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.67 | 57.0 | 4.73e-01 | 97.7% | 73.4% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.86e-01 | 100.0% | 68.2% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 51.0 | 4.43e-01 | 100.0% | 53.8% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 52.0 | 3.99e-01 | 100.0% | 75.8% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.65 | 48.0 | 4.46e-01 | 88.6% | 85.7% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 52.0 | 4.38e-01 | 97.7% | 59.8% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 48.0 | 4.56e-01 | 100.0% | 76.3% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 4.12e-01 | 100.0% | 60.6% |
| 1j75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.55e-01 | 97.7% | 78.9% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.61 | 48.0 | 3.84e-01 | 100.0% | 62.7% |
| 1iyrA00 | 1.10.1490.10 | Mainly Alpha › Orthogonal Bundle › Dna Fragmentation Factor Alpha Subunit; Chain: A; › C-terminal domain of DFF45/ICAD (DFF-C domain) | 0.60 | 48.0 | 4.07e-01 | 97.7% | 54.2% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.59 | 44.0 | 3.63e-01 | 81.8% | 53.1% |
| 1bw5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 44.0 | 4.09e-01 | 100.0% | 72.7% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 45.0 | 4.49e-01 | 97.7% | 91.5% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 47.0 | 4.13e-01 | 97.7% | 92.4% |
| 2ii2A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.55 | 46.0 | 3.89e-01 | 97.7% | 63.3% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.54 | 42.0 | 3.09e-01 | 100.0% | 56.6% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 44.0 | 4.02e-01 | 100.0% | 79.0% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 43.0 | 3.03e-01 | 100.0% | 36.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244316 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.79 | 64.0 | 5.75e-01 | 97.7% | 64.6% |
| 5001891 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.73 | 61.0 | 3.60e-01 | 95.5% | 13.2% |
| 3693234 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 60.0 | 5.19e-01 | 100.0% | 70.7% |
| 4964802 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.47e-01 | 100.0% | 73.3% |
| 3946334 | 101.1.2.121 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_43 | 0.70 | 57.0 | 4.71e-01 | 100.0% | 48.9% |
| 4135670 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.70 | 60.0 | 3.52e-01 | 100.0% | 23.5% |
| 3727217 | 101.1.2.384 ↗ | alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 | 0.69 | 57.0 | 5.57e-01 | 100.0% | 92.0% |
| 4954772 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 57.0 | 5.44e-01 | 100.0% | 85.5% |
| 3947986 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.68 | 57.0 | 5.23e-01 | 100.0% | 80.0% |
| 4965036 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.67 | 55.0 | 4.21e-01 | 100.0% | 38.3% |
| 4994237 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.65 | 53.0 | 4.30e-01 | 100.0% | 48.4% |
| 3286028 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.64 | 53.0 | 4.60e-01 | 100.0% | 61.3% |
| 4038813 | 3697.1.1.1 ↗ | alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx | 0.64 | 50.0 | 4.13e-01 | 97.7% | 47.4% |
| 3970291 | 101.1.1.217 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C | 0.61 | 46.0 | 4.65e-01 | 95.5% | 93.3% |
| 4544247 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.60 | 48.0 | 4.48e-01 | 97.7% | 81.7% |
| 3433370 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.59 | 47.0 | 3.93e-01 | 100.0% | 68.1% |
| 3218285 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 44.0 | 3.68e-01 | 100.0% | 49.5% |
| 3880271 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.51 | 42.0 | 2.70e-01 | 95.5% | 67.6% |