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MT889392.1__QOP66607.1__SEA_LAHQTEMISH_16__00016
Bact-VirMT889392.1__QOP66607.1__SEA_LAHQTEMISH_16__00016
Identity
- Accession:
- MT889392 ↗
- Kingdom:
- phage
Quality
60.3
mean pLDDT
Taxonomy
TaxID: 2776867
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 325-477
D2
medium
residues 65-230
Domain cluster:
rep: EU849489.1__ACJ24742.1__X__00018__D261-414
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vmaA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.57 | 32.0 | 3.62e-01 | 74.1% | 71.3% |
| 2lm4A01 | 1.10.150.250 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase | 0.53 | 29.0 | 3.72e-01 | 83.7% | 93.5% |
| 8jpdG01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.53 | 36.0 | 3.78e-01 | 75.3% | 75.9% |
| 2dqbB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 41.0 | 3.24e-01 | 83.7% | 70.5% |
| 3vz3A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 43.0 | 3.68e-01 | 89.2% | 76.8% |
| 5vbfA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 42.0 | 3.55e-01 | 89.8% | 71.2% |
| 4axzA00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.51 | 44.0 | 4.05e-01 | 95.8% | 83.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941716 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.78 | 52.0 | 5.85e-01 | 84.3% | 86.2% |
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.77 | 59.0 | 6.21e-01 | 95.2% | 86.7% |
| 3980709 | 103.4.1.27 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TMP_2 | 0.76 | 68.0 | 6.91e-01 | 96.4% | 98.8% |
| 3164789 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.73 | 66.0 | 6.68e-01 | 95.8% | 100.0% |
| 4986458 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.72 | 48.0 | 5.29e-01 | 84.9% | 83.8% |
| 3981280 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.68 | 56.0 | 6.01e-01 | 93.4% | 97.9% |
| 3963765 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.67 | 60.0 | 5.70e-01 | 94.6% | 90.5% |
| 4044743 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.57 | 31.0 | 3.67e-01 | 74.1% | 74.8% |
| 3600308 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.52 | 40.0 | 3.54e-01 | 79.5% | 92.5% |
| 3706867 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 45.0 | 3.24e-01 | 97.6% | 92.5% |
D3
medium
residues 231-291
D4
medium
residues 511-586
D5
medium
residues 683-734
D6
medium
residues 735-916
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08291.17 best | Peptidase_M15_3 | 36.7 | 5.40e-09 | 36.3% | 38.0% |