←Back to structures

MT899443.1__QOI69806.1__X__00022

Bact-Vir

MT899443.1__QOI69806.1__X__00022

Identity

Accession:
MT899443 ↗
Kingdom:
phage

Quality

70.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Liberibacter_phage_P-PA19-2

TaxID: 2768129

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09669.16 best Phage_pRha 31.2 3.80e-07 70.2% 34.1%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kilA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.62 46.0 3.34e-01 77.6% 59.1%
4dsfA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.56 41.0 3.57e-01 80.6% 62.7%
1ho8A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 44.0 2.93e-01 97.0% 41.5%
1eyvB00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.53 42.0 3.53e-01 92.5% 75.9%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.53 37.0 3.03e-01 76.1% 51.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3285621 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 51.0 4.83e-01 70.1% 60.0%
5040558 101.1.2.162 ↗ alpha arrays › HTH › HTH › winged helix domain › DprA_WH 0.65 45.0 4.34e-01 71.6% 81.3%
3976327 101.1.9.41 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N 0.65 42.0 4.99e-01 70.1% 100.0%
5004272 101.1.9.41 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N 0.63 42.0 4.55e-01 76.1% 83.6%