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MT920315.1__QOI66486.1__X__00110

Bact-Vir

MT920315.1__QOI66486.1__X__00110

Identity

Accession:
MT920315 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Risoevirus› Erwinia_phage_FBB1

TaxID: 2776772

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-200
PDB
Domain cluster: rep: IMGVR_UViG_3300039190_000305-3300039190-Ga0399989_003201_3_1937__D82-97_167-336
D2 high residues 350-467
PDB
Domain cluster: rep: MK577502.1__QBX32686.1__Asfd1_60__00060__D354-483
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zbkA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.55 47.0 3.84e-01 94.1% 90.3%
3elbA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 42.0 3.82e-01 82.2% 84.2%
1d3yB02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.55 47.0 3.89e-01 94.9% 93.5%
3cf4A02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 3.62e-01 86.4% 83.7%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.51 41.0 4.17e-01 92.4% 91.2%
2wj6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 40.0 3.40e-01 86.4% 91.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3468598 3703.1.1.1 ↗ a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 0.60 47.0 4.59e-01 94.1% 76.2%
3603650 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.51 45.0 3.70e-01 100.0% 91.0%
4024832 2003.1.1.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.50 43.0 2.95e-01 94.9% 99.8%
D3 high residues 484-577
PDB
Domain cluster: rep: MW598459.1__UGL59843.1__X__00027__D84-169
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f6uA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.54 39.0 2.97e-01 75.5% 82.7%
4io2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 36.0 3.21e-01 71.3% 75.4%
1xg8A00 3.40.30.30 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Hypothetical protein sa0798. 0.52 36.0 3.47e-01 71.3% 85.2%
4q34A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 42.0 2.98e-01 91.5% 96.0%
2a6hC04 2.30.150.10 Mainly Beta › Roll › Rna Polymerase Beta Subunit; Chain: C, domain 4 › DNA-directed RNA polymerase, beta subunit, external 1 domain 0.51 34.0 3.97e-01 77.7% 100.0%
1rqeA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 35.0 2.59e-01 71.3% 93.3%
1vizA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.51 36.0 2.84e-01 76.6% 89.8%
3kbrA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 34.0 3.06e-01 70.2% 77.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3726614 2007.1.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.58 52.0 3.37e-01 100.0% 38.1%
4024972 7568.1.1.1 ↗ a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.57 39.0 3.98e-01 70.2% 90.0%
3559152 386.1.1.299 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30478 0.54 26.0 3.25e-01 98.9% 78.0%
3401572 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.53 36.0 2.90e-01 70.2% 84.3%
3628722 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.50 35.0 3.18e-01 90.4% 52.3%
D4 high residues 583-702
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.58 41.0 3.43e-01 72.5% 83.6%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.55 33.0 3.79e-01 72.5% 81.6%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.51 35.0 3.68e-01 70.0% 82.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944388 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.56 41.0 3.59e-01 76.7% 86.1%
3720488 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.55 39.0 3.81e-01 71.7% 72.3%
D5 medium residues 213-302
PDB
Domain cluster: rep: MW824370.1__QZI89871.1__MYOV002v2_p0166__00166__D290-363