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MT920315.1__QOI66516.1__X__00140

Bact-Vir

MT920315.1__QOI66516.1__X__00140

Identity

Accession:
MT920315 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Risoevirus› Erwinia_phage_FBB1

TaxID: 2776772

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-89
PDB
Domain cluster: rep: MN098326.1__QFG06632.1__CPT_Myduc_009__00009__D5-70
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23945.2 best DUF7279 72.3 3.20e-20 60.2% 96.2%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tjjB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.73 51.0 3.98e-01 85.2% 35.4%
3r4kA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.72 50.0 3.89e-01 86.4% 35.2%
3mq0B02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.72 50.0 3.95e-01 86.4% 36.6%
3hcyA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.70 61.0 5.07e-01 92.0% 57.9%
3obfA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.70 49.0 3.85e-01 86.4% 35.8%
4bwiB01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.70 63.0 4.85e-01 98.9% 54.2%
2o0yB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.68 50.0 3.96e-01 87.5% 38.4%
2jxpA01 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.67 58.0 4.91e-01 93.2% 61.7%
2xssA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.67 54.0 4.42e-01 85.2% 49.4%
4o01D01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.67 54.0 4.10e-01 88.6% 37.2%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 44.0 3.33e-01 81.8% 27.4%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.65 58.0 4.78e-01 97.7% 59.4%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.65 54.0 4.24e-01 100.0% 44.8%
4lrzE01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.65 46.0 3.65e-01 81.8% 36.5%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.65 56.0 4.79e-01 100.0% 60.6%
4gw9A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.64 51.0 3.77e-01 84.1% 47.0%
2iqiB00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.63 52.0 4.24e-01 93.2% 47.4%
4g3wA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.59 46.0 3.96e-01 85.2% 53.3%
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 37.0 3.30e-01 83.0% 42.4%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 46.0 3.51e-01 86.4% 83.4%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.57 41.0 3.01e-01 85.2% 27.7%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 38.0 4.26e-01 78.4% 95.2%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.56 50.0 3.16e-01 100.0% 79.2%
2wkcB00 2.40.50.400 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein 0.56 34.0 3.44e-01 70.5% 59.6%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 3.89e-01 81.8% 83.5%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 42.0 3.90e-01 84.1% 63.2%
4c1wA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 37.0 2.90e-01 70.5% 80.3%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 34.0 3.22e-01 71.6% 53.8%
1ac5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 43.0 2.81e-01 98.9% 93.2%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 32.0 3.19e-01 71.6% 60.0%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 36.0 3.22e-01 76.1% 79.1%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3527281 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.73 50.0 3.90e-01 79.5% 33.5%
3193241 223.2.1.22 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.72 56.0 4.88e-01 92.0% 56.2%
3610978 330.1.1.22 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.71 49.0 4.45e-01 83.0% 53.9%
4830163 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.71 48.0 3.88e-01 86.4% 36.7%
3593377 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 54.0 4.95e-01 81.8% 62.6%
4022522 223.2.1.48 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, Longin_2 0.67 57.0 4.53e-01 92.0% 48.0%
4940463 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 48.0 4.17e-01 86.4% 48.9%
3959610 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.67 47.0 4.01e-01 71.6% 48.9%
5031452 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.66 46.0 4.52e-01 81.8% 67.4%
3624927 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 44.0 4.20e-01 81.8% 58.1%
3443030 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 45.0 4.68e-01 77.3% 78.8%
3688228 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 57.0 4.33e-01 96.6% 56.6%
3787176 4099.1.1.4 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O 0.65 47.0 4.18e-01 77.3% 86.2%
4934746 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.65 54.0 4.66e-01 92.0% 59.3%
3808882 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.64 59.0 4.64e-01 100.0% 52.0%
3942062 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.64 53.0 4.41e-01 88.6% 52.7%
3221278 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 41.0 2.80e-01 75.0% 18.4%
3224865 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.64 49.0 3.52e-01 86.4% 27.5%
4308194 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.63 44.0 4.53e-01 89.8% 75.3%
3735657 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.63 52.0 4.13e-01 89.8% 47.8%
3993341 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 44.0 4.49e-01 72.7% 74.1%
3974473 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.63 49.0 4.23e-01 84.1% 86.4%
3451695 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 42.0 4.26e-01 83.0% 68.9%
3713550 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 44.0 3.86e-01 81.8% 50.0%
3957641 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.62 38.0 4.56e-01 71.6% 98.2%
3589216 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.61 34.0 2.49e-01 89.8% 19.6%
3955267 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.61 47.0 4.04e-01 93.2% 53.0%
3971164 5085.1.1.1 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.61 55.0 3.50e-01 100.0% 79.3%
3674239 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.60 41.0 3.88e-01 70.5% 65.7%
5057921 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.60 36.0 2.58e-01 79.5% 21.4%
4189433 223.1.1.81 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_WalK 0.58 45.0 3.41e-01 98.9% 36.0%
3579353 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 42.0 3.81e-01 76.1% 62.5%
3269184 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 42.0 4.16e-01 79.5% 76.8%
3959672 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 48.0 3.92e-01 95.5% 95.8%
3408176 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 45.0 4.09e-01 88.6% 85.0%
3927132 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.55 42.0 3.90e-01 83.0% 63.5%
3724001 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.55 36.0 3.20e-01 78.4% 45.4%
3701091 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 2.98e-01 100.0% 38.7%
4232994 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.53 34.0 3.16e-01 75.0% 51.8%
4020185 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.52 37.0 3.36e-01 73.9% 57.5%
3407004 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.52 45.0 3.39e-01 96.6% 81.4%
3703275 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 36.0 3.39e-01 75.0% 61.7%
3997689 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.51 43.0 2.87e-01 90.9% 90.4%
3427136 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.50e-01 88.6% 56.9%